RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 TAF3Q5VWG9 929 aa11.12□□□□□ -0.63
VPS25-206ENST00000591584 EMBQ6PCB8 327 aa11.12□□□□□ -0.63
VPS25-206ENST00000591584 ZBTB33Q86T24 672 aa11.12□□□□□ -0.63
VPS25-206ENST00000591584 SOCS4Q8WXH5 440 aa11.12□□□□□ -0.63
VPS25-206ENST00000591584 ZNF653Q96CK0 615 aa11.12□□□□□ -0.63
VPS25-206ENST00000591584 ADPGKQ9BRR6 497 aa11.12□□□□□ -0.63
VPS25-206ENST00000591584 IFT122Q9HBG6 1241 aa11.12□□□□□ -0.63
VPS25-206ENST00000591584 MRPL47Q9HD33 250 aaKnown RBP11.12□□□□□ -0.63
VPS25-206ENST00000591584 OSGEPQ9NPF4 335 aa11.12□□□□□ -0.63
VPS25-206ENST00000591584 GDF3Q9NR23 364 aa11.12□□□□□ -0.63
VPS25-206ENST00000591584 TAS2R14Q9NYV8 317 aa11.12□□□□□ -0.63
VPS25-206ENST00000591584 ZHX1Q9UKY1 873 aaPredicted RBP11.12□□□□□ -0.63
VPS25-206ENST00000591584 AKT3Q9Y243 479 aa11.12□□□□□ -0.63
VPS25-206ENST00000591584 NRCAMQ92823 1304 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 DOCK5Q9H7D0 1870 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 GOLGA6L10A0A0M3HER8 536 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 SMIM35A0A1B0GVV1 85 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 DCAF8L1A6NGE4 600 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 DDX3YO15523 660 aaKnown RBP11.11□□□□□ -0.63
VPS25-206ENST00000591584 KPNA6O60684 536 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 LSM8O95777 96 aaKnown RBP11.11□□□□□ -0.63
VPS25-206ENST00000591584 ITGBL1O95965 494 aaPredicted RBP11.11□□□□□ -0.63
VPS25-206ENST00000591584 TFRCP02786 760 aaKnown RBP11.11□□□□□ -0.63
VPS25-206ENST00000591584 EDN1P05305 212 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 P4HA1P13674 534 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 AXLP30530 894 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 GNA15P30679 374 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 RGS2P41220 211 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 ZNF157P51786 506 aaPredicted RBP11.11□□□□□ -0.63
VPS25-206ENST00000591584 CLCN3P51790 818 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 EPHB4P54760 987 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 GABPB1Q06547 395 aaPredicted RBP11.11□□□□□ -0.63
VPS25-206ENST00000591584 C1QBPQ07021 282 aaKnown RBP11.11□□□□□ -0.63
VPS25-206ENST00000591584 MKRN3Q13064 507 aaKnown RBP11.11□□□□□ -0.63
VPS25-206ENST00000591584 GRIK4Q16099 956 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 DCAF4L1Q3SXM0 396 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 CST9Q5W186 159 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 PHF13Q86YI8 300 aaPredicted RBP11.11□□□□□ -0.63
VPS25-206ENST00000591584 EFCAB13Q8IY85 973 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 MCOLN2Q8IZK6 566 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 UBR7Q8N806 425 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 ZNF564Q8TBZ8 553 aaPredicted RBP11.11□□□□□ -0.63
VPS25-206ENST00000591584 MAIP1Q8WWC4 291 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 ARHGEF26Q96DR7 871 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 PSMB7Q99436 277 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 LRRC1Q9BTT6 524 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 PI4K2AQ9BTU6 479 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 NUP85Q9BW27 656 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 KATNAL1Q9BW62 490 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 NIF3L1Q9GZT8 377 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 VRTNQ9H8Y1 702 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 PLEKHA5Q9HAU0 1116 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 CYP3A43Q9HB55 503 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 APOBEC3GQ9HC16 384 aaKnown RBP11.11□□□□□ -0.63
VPS25-206ENST00000591584 ZFYVE28Q9HCC9 887 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 RBM12Q9NTZ6 932 aaKnown RBP11.11□□□□□ -0.63
VPS25-206ENST00000591584 CNOT8Q9UFF9 292 aaKnown RBP11.11□□□□□ -0.63
VPS25-206ENST00000591584 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.11□□□□□ -0.63
VPS25-206ENST00000591584 SCINQ9Y6U3 715 aa11.11□□□□□ -0.63
VPS25-206ENST00000591584 ZNFX1Q9P2E3 1918 aaKnown RBP11.1□□□□□ -0.63
VPS25-206ENST00000591584 A0A1B0GUA9 196 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 KRIT1O00522 736 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 MED7O43513 233 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 SEC31AO94979 1220 aaKnown RBP11.1□□□□□ -0.63
VPS25-206ENST00000591584 STAU1O95793 577 aaKnown RBP11.1□□□□□ -0.63
VPS25-206ENST00000591584 HARSP12081 509 aaKnown RBP11.1□□□□□ -0.63
VPS25-206ENST00000591584 EIF4BP23588 611 aaKnown RBP11.1□□□□□ -0.63
VPS25-206ENST00000591584 CPT1AP50416 773 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 ZNF132P52740 706 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 IGBP1P78318 339 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 SREBF2Q12772 1141 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 PAK2Q13177 524 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 CUL1Q13616 776 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 CASP8Q14790 479 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 TAF1CQ15572 869 aaPredicted RBP11.1□□□□□ -0.63
VPS25-206ENST00000591584 ZBTB41Q5SVQ8 909 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 LMBRD2Q68DH5 695 aaPredicted RBP11.1□□□□□ -0.63
VPS25-206ENST00000591584 RGMBQ6NW40 437 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 TMEM270Q6UE05 265 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 C17orf99Q6UX52 265 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 PALB2Q86YC2 1186 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 RASAL3Q86YV0 1011 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 THNSL1Q8IYQ7 743 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 NME8Q8N427 588 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 RBBP8NLQ8NC74 664 aaPredicted RBP11.1□□□□□ -0.63
VPS25-206ENST00000591584 OR5B17Q8NGF7 314 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 NPLOC4Q8TAT6 608 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 TRAPPC12Q8WVT3 735 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 USP6NLQ92738 828 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 MS4A14Q96JA4 679 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 GCOM2Q9BZD3 368 aaPredicted RBP11.1□□□□□ -0.63
VPS25-206ENST00000591584 UBXN6Q9BZV1 441 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 CDT1Q9H211 546 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 MED4Q9NPJ6 270 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.1□□□□□ -0.63
VPS25-206ENST00000591584 PCDHGC3Q9UN70 934 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 PACSIN2Q9UNF0 486 aaPredicted RBP11.1□□□□□ -0.63
VPS25-206ENST00000591584 COG5Q9UP83 839 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 GNEQ9Y223 722 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms