RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ABLIM3O94929 683 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 CTDNEP1O95476 244 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 LRG1P02750 347 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 CHRNB1P11230 501 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 BRCC3P46736 316 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 ROR1Q01973 937 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 DMWDQ09019 674 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 SIM2Q14190 667 aaPredicted RBP19.09■□□□□ 0.65
RETREG3-210ENST00000590541 ME3Q16798 604 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 GLRA4Q5JXX5 417 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 SLC8B1Q6J4K2 584 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 VITQ6UXI7 678 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 ZBTB8OSQ8IWT0 167 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 C3orf58Q8NDZ4 430 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 IRF7Q92985 503 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 CCDC43Q96MW1 224 aaKnown RBP19.09■□□□□ 0.65
RETREG3-210ENST00000590541 ASB16Q96NS5 453 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 PPP1R10Q96QC0 940 aaKnown RBP19.09■□□□□ 0.65
RETREG3-210ENST00000590541 CORO1BQ9BR76 489 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 PCDHA12Q9UN75 941 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 PIAS3Q9Y6X2 628 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 WDR27A2RRH5 827 aa19.08■□□□□ 0.64
RETREG3-210ENST00000590541 MICAL2O94851 1124 aa19.08■□□□□ 0.64
RETREG3-210ENST00000590541 GDI1P31150 447 aa19.08■□□□□ 0.64
RETREG3-210ENST00000590541 CXCL12P48061 93 aa19.08■□□□□ 0.64
RETREG3-210ENST00000590541 SRSF5Q13243 272 aaKnown RBP19.08■□□□□ 0.64
RETREG3-210ENST00000590541 PRPF4BQ13523 1007 aaKnown RBP19.08■□□□□ 0.64
RETREG3-210ENST00000590541 UPP1Q16831 310 aa19.08■□□□□ 0.64
RETREG3-210ENST00000590541 EEF1DP3Q658K8 133 aa19.08■□□□□ 0.64
RETREG3-210ENST00000590541 ZSWIM3Q96MP5 696 aa19.08■□□□□ 0.64
RETREG3-210ENST00000590541 GOLGA2P5Q9HBQ8 144 aa19.08■□□□□ 0.64
RETREG3-210ENST00000590541 GDAQ9Y2T3 454 aa19.08■□□□□ 0.64
RETREG3-210ENST00000590541 F5P12259 2224 aa19.08■□□□□ 0.64
RETREG3-210ENST00000590541 TICRRQ7Z2Z1 1910 aa19.08■□□□□ 0.64
RETREG3-210ENST00000590541 NCANO14594 1321 aa19.07■□□□□ 0.64
RETREG3-210ENST00000590541 CHURC1-FNTBB4DL54 471 aa19.07■□□□□ 0.64
RETREG3-210ENST00000590541 DTNBO60941 627 aa19.07■□□□□ 0.64
RETREG3-210ENST00000590541 XRCC6P12956 609 aaKnown RBP eCLIP19.07■□□□□ 0.64
RETREG3-210ENST00000590541 PSMC3P17980 439 aa19.07■□□□□ 0.64
RETREG3-210ENST00000590541 FNTBP49356 437 aa19.07■□□□□ 0.64
RETREG3-210ENST00000590541 BSNDQ8WZ55 320 aa19.07■□□□□ 0.64
RETREG3-210ENST00000590541 ADPGKQ9BRR6 497 aa19.07■□□□□ 0.64
RETREG3-210ENST00000590541 CCDC113Q9H0I3 377 aa19.07■□□□□ 0.64
RETREG3-210ENST00000590541 TTC12Q9H892 705 aaPredicted RBP19.07■□□□□ 0.64
RETREG3-210ENST00000590541 ACKR2O00590 384 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 PRRG1O14668 218 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 ZNF197O14709 1029 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 TRAPPC3O43617 180 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 MOSPD3O75425 235 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 SEC24AO95486 1093 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 SEC24BO95487 1268 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 PRKCBP05771 671 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 ATF2P15336 505 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 ELF1P32519 619 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 KRT2P35908 639 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 NR5A1Q13285 461 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 MAPK6Q16659 721 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 TMEM132AQ24JP5 1023 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 TCEAL8Q8IYN2 117 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 NECAB1Q8N987 351 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 NSUN7Q8NE18 718 aaKnown RBP19.06■□□□□ 0.64
RETREG3-210ENST00000590541 SMARCD2Q92925 531 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 UROC1Q96N76 676 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 C2orf40Q9H1Z8 148 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 LIMCH1Q9UPQ0 1083 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 INSL5Q9Y5Q6 135 aa19.06■□□□□ 0.64
RETREG3-210ENST00000590541 K7ESF4 209 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 ARNTLO00327 626 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 SPATA31C1P0DKV0 1188 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 FDPSP14324 419 aaKnown RBP19.05■□□□□ 0.64
RETREG3-210ENST00000590541 ATP2B1P20020 1258 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 CCNE1P24864 410 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 VIPR2P41587 438 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 SOX4Q06945 474 aaPredicted RBP19.05■□□□□ 0.64
RETREG3-210ENST00000590541 PTGDRQ13258 359 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 TRIM29Q14134 588 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 CALCRLQ16602 461 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 PDZD4Q76G19 769 aaPredicted RBP19.05■□□□□ 0.64
RETREG3-210ENST00000590541 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.05■□□□□ 0.64
RETREG3-210ENST00000590541 HS6ST3Q8IZP7 471 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 SPEM1Q8N4L4 309 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 MCPH1Q8NEM0 835 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 DEPDC1BQ8WUY9 529 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 TNFRSF25Q93038 417 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 CYP4F11Q9HBI6 524 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 ANGPTL2Q9UKU9 493 aa19.05■□□□□ 0.64
RETREG3-210ENST00000590541 PAPSS2O95340 614 aaPredicted RBP19.04■□□□□ 0.64
RETREG3-210ENST00000590541 LARGE1O95461 756 aa19.04■□□□□ 0.64
RETREG3-210ENST00000590541 LIG1P18858 919 aa19.04■□□□□ 0.64
RETREG3-210ENST00000590541 PMLP29590 882 aa19.04■□□□□ 0.64
RETREG3-210ENST00000590541 CNR2P34972 360 aa19.04■□□□□ 0.64
RETREG3-210ENST00000590541 TXKP42681 527 aa19.04■□□□□ 0.64
RETREG3-210ENST00000590541 ARPP19P56211 112 aa19.04■□□□□ 0.64
RETREG3-210ENST00000590541 DCAF4L1Q3SXM0 396 aa19.04■□□□□ 0.64
RETREG3-210ENST00000590541 WDR44Q5JSH3 913 aa19.04■□□□□ 0.64
RETREG3-210ENST00000590541 LONP2Q86WA8 852 aa19.04■□□□□ 0.64
RETREG3-210ENST00000590541 TRPV4Q9HBA0 871 aa19.04■□□□□ 0.64
RETREG3-210ENST00000590541 RBM12Q9NTZ6 932 aaKnown RBP19.04■□□□□ 0.64
RETREG3-210ENST00000590541 RALYQ9UKM9 306 aaKnown RBP19.04■□□□□ 0.64
RETREG3-210ENST00000590541 CHD6Q8TD26 2715 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms