RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SESTD1Q86VW0 696 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 ZBTB8BQ8NAP8 495 aaPredicted RBP16.09■□□□□ 0.17
CIRBP-228ENST00000590347 TGFBRAP1Q8WUH2 860 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 SRPK1Q96SB4 655 aaKnown RBP16.09■□□□□ 0.17
CIRBP-228ENST00000590347 TMEM109Q9BVC6 243 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 IQCGQ9H095 443 aaKnown RBP16.09■□□□□ 0.17
CIRBP-228ENST00000590347 STK32BQ9NY57 414 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 TAF1P21675 1872 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 EXOC1LA0A1B0GW35 172 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 AKAP3O75969 853 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 EYA4O95677 639 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 AQP4P55087 323 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 TFAP4Q01664 338 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 PPATQ06203 517 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 FASTKD3Q14CZ7 662 aaKnown RBP16.09■□□□□ 0.17
CIRBP-228ENST00000590347 SEL1L2Q5TEA6 688 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 PPP1R21Q6ZMI0 780 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 RIN3Q8TB24 985 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 NCSTNQ92542 709 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 SLX1AQ9BQ83 275 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 ROPN1BQ9BZX4 212 aaPredicted RBP16.09■□□□□ 0.17
CIRBP-228ENST00000590347 KLHL4Q9C0H6 718 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 ROPN1Q9HAT0 212 aaPredicted RBP16.09■□□□□ 0.17
CIRBP-228ENST00000590347 UMODL1Q5DID0 1318 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 POTEJP0CG39 1038 aa16.08■□□□□ 0.17
CIRBP-228ENST00000590347 PRKCIP41743 596 aa16.08■□□□□ 0.17
CIRBP-228ENST00000590347 STAT1P42224 750 aa16.08■□□□□ 0.17
CIRBP-228ENST00000590347 SPARCL1Q14515 664 aa16.08■□□□□ 0.17
CIRBP-228ENST00000590347 PPP2R5BQ15173 497 aa16.08■□□□□ 0.17
CIRBP-228ENST00000590347 VPS72Q15906 364 aa16.08■□□□□ 0.17
CIRBP-228ENST00000590347 NCCRP1Q6ZVX7 275 aaPredicted RBP16.08■□□□□ 0.17
CIRBP-228ENST00000590347 NEK8Q86SG6 692 aa16.08■□□□□ 0.17
CIRBP-228ENST00000590347 DGKHQ86XP1 1220 aa16.08■□□□□ 0.17
CIRBP-228ENST00000590347 AK5Q9Y6K8 562 aa16.08■□□□□ 0.17
CIRBP-228ENST00000590347 LTBP4Q8N2S1 1624 aa16.08■□□□□ 0.17
CIRBP-228ENST00000590347 PDLIM1O00151 329 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 CDK4P11802 303 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 XRCC5P13010 732 aaKnown RBP16.08■□□□□ 0.16
CIRBP-228ENST00000590347 ATP5DP30049 168 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 DRAP1Q14919 205 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-228ENST00000590347 SPDYCQ5MJ68 293 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 C1orf146Q5VVC0 180 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 RGS9BPQ6ZS82 235 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 TREML1Q86YW5 311 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 SYT2Q8N9I0 419 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-228ENST00000590347 PIP4K2CQ8TBX8 421 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 ZNF75CPQ92670 426 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-228ENST00000590347 SLC35B4Q969S0 331 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 GRAMD1AQ96CP6 724 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 DNAJC19Q96DA6 116 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 DNAJC18Q9H819 358 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 RIC8AQ9NPQ8 531 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 LARSQ9P2J5 1176 aaKnown RBP16.08■□□□□ 0.16
CIRBP-228ENST00000590347 KIAA1024Q9UPX6 916 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 BAZ2AQ9UIF9 1905 aaKnown RBP16.08■□□□□ 0.16
CIRBP-228ENST00000590347 AHDC1Q5TGY3 1603 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-228ENST00000590347 BTNL10A8MVZ5 291 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 M0R2N6 131 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 PODXLO00592 558 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 RAD21O60216 631 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 DKC1O60832 514 aaKnown RBP eCLIP16.08■□□□□ 0.16
CIRBP-228ENST00000590347 VIL1P09327 827 aaKnown RBP16.08■□□□□ 0.16
CIRBP-228ENST00000590347 TNFAIP3P21580 790 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 RFC4P35249 363 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 MLH1P40692 756 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 TNNI2P48788 182 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 ZNF554Q86TJ5 538 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 GPBP1Q86WP2 473 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 MARCOQ9UEW3 520 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-228ENST00000590347 APPL1Q9UKG1 709 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 PACSIN3Q9UKS6 424 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 TRAF3IP3Q9Y228 551 aa16.08■□□□□ 0.16
CIRBP-228ENST00000590347 USP17L8P0C7I0 530 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 TRIM49P0CI25 452 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 TRIM49CP0CI26 452 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 PPP1R2P41236 205 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 RCAN1P53805 252 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 RPS8P62241 208 aaKnown RBP16.07■□□□□ 0.16
CIRBP-228ENST00000590347 GK3PQ14409 553 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 SGO2Q562F6 1265 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 KRT79Q5XKE5 535 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 TRMT10CQ7L0Y3 403 aaKnown RBP16.07■□□□□ 0.16
CIRBP-228ENST00000590347 NSL1Q96IY1 281 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 FAM84BQ96KN1 310 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-228ENST00000590347 PANX3Q96QZ0 392 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 CORO1BQ9BR76 489 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 HERPUD2Q9BSE4 406 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 STK33Q9BYT3 514 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 METTL14Q9HCE5 456 aaKnown RBP16.07■□□□□ 0.16
CIRBP-228ENST00000590347 PARP2Q9UGN5 583 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 ANAPC5Q9UJX4 755 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 BARX2Q9UMQ3 279 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-228ENST00000590347 PVALEFA0A1B0GWK0 134 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 GOLGA8SH3BPF8 625 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 GOLGA8MH3BSY2 632 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 CALCAP01258 141 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 KITP10721 976 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 RRM1P23921 792 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 PRDX5P30044 214 aa16.07■□□□□ 0.16
CIRBP-228ENST00000590347 NR1H3Q13133 447 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms