RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 DUSP9Q99956 384 aaKnown RBP13.92□□□□□ -0.18
DDX39A-213ENST00000590315 C11orf84Q9BUA3 381 aaPredicted RBP13.92□□□□□ -0.18
DDX39A-213ENST00000590315 DPP3Q9NY33 737 aa13.92□□□□□ -0.18
DDX39A-213ENST00000590315 SPG21Q9NZD8 308 aa13.92□□□□□ -0.18
DDX39A-213ENST00000590315 MAGEC2Q9UBF1 373 aaPredicted RBP13.92□□□□□ -0.18
DDX39A-213ENST00000590315 DERAQ9Y315 318 aa13.92□□□□□ -0.18
DDX39A-213ENST00000590315 C2CD2Q9Y426 696 aa13.92□□□□□ -0.18
DDX39A-213ENST00000590315 NUB1Q9Y5A7 615 aa13.92□□□□□ -0.18
DDX39A-213ENST00000590315 CARNS1A5YM72 827 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 SLC16A3O15427 465 aaKnown RBP13.91□□□□□ -0.18
DDX39A-213ENST00000590315 TADA2AO75478 443 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 ITGB3P05106 788 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 GALTP07902 379 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 ERCC5P28715 1186 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-213ENST00000590315 ERVK-21P61565 698 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 POU5F1Q01860 360 aaKnown RBP13.91□□□□□ -0.18
DDX39A-213ENST00000590315 KRT17Q04695 432 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 DSC1Q08554 894 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 BFSP1Q12934 665 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 NT5DC4Q86YG4 428 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 WDR49Q8IV35 697 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 AOPEPQ8N6M6 819 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 KLHL23Q8NBE8 558 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 CLP1Q92989 425 aaKnown RBP13.91□□□□□ -0.18
DDX39A-213ENST00000590315 MFSD14AQ96MC6 490 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 TSPAN18Q96SJ8 248 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 POP1Q99575 1024 aaKnown RBP13.91□□□□□ -0.18
DDX39A-213ENST00000590315 PAAF1Q9BRP4 392 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 MKNK1Q9BUB5 465 aa13.91□□□□□ -0.18
DDX39A-213ENST00000590315 ALG13Q9NP73 1137 aaKnown RBP13.91□□□□□ -0.18
DDX39A-213ENST00000590315 ARMCX3Q9UH62 379 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-213ENST00000590315 PTPRJQ12913 1337 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 LRRIQ3A6PVS8 624 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-213ENST00000590315 F8W810 466 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 FGF18O76093 207 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 B3GAT3O94766 335 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 KIF4AO95239 1232 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 POLR2BP30876 1174 aaKnown RBP13.9□□□□□ -0.18
DDX39A-213ENST00000590315 MTIF2P46199 727 aaKnown RBP13.9□□□□□ -0.18
DDX39A-213ENST00000590315 DLG4P78352 724 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 TRPC3Q13507 836 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 DUOXA2Q1HG44 320 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 SPATA1Q5VX52 437 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 FILIP1Q7Z7B0 1213 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 FAM114A1Q8IWE2 563 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 SLC39A11Q8N1S5 342 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 DDX27Q96GQ7 796 aaKnown RBP13.9□□□□□ -0.18
DDX39A-213ENST00000590315 CNOT6LQ96LI5 555 aaKnown RBP13.9□□□□□ -0.18
DDX39A-213ENST00000590315 PLVAPQ9BX97 442 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 PRDM12Q9H4Q4 367 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 METTL14Q9HCE5 456 aaKnown RBP13.9□□□□□ -0.18
DDX39A-213ENST00000590315 INTS13Q9NVM9 706 aa13.9□□□□□ -0.18
DDX39A-213ENST00000590315 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-213ENST00000590315 MYH10P35580 1976 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 TMEM265A0A087WTH1 108 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 BECN2A8MW95 431 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 RFXAPO00287 272 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 PES1O00541 588 aaKnown RBP13.89□□□□□ -0.19
DDX39A-213ENST00000590315 MAPK13O15264 365 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 STX10O60499 249 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 GNA14O95837 355 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 RB1P06400 928 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 CYP3A5P20815 502 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 RPL9P32969 192 aaKnown RBP13.89□□□□□ -0.19
DDX39A-213ENST00000590315 PIK3CAP42336 1068 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 MYL5Q02045 173 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 NAB2Q15742 525 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 CT47A1Q5JQC4 288 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-213ENST00000590315 C9orf57Q5W0N0 161 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 Q7L0L9 218 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 TMEM173Q86WV6 379 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-213ENST00000590315 ZC3H3Q8IXZ2 948 aaKnown RBP13.89□□□□□ -0.19
DDX39A-213ENST00000590315 OR5B17Q8NGF7 314 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 PLEKHO2Q8TD55 490 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 TMC2Q8TDI7 906 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 PARD3BQ8TEW8 1205 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 IGSF21Q96ID5 467 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 ZNF560Q96MR9 790 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 TTYH1Q9H313 450 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-213ENST00000590315 ENTPD7Q9NQZ7 604 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 MARCH5Q9NX47 278 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 PUF60Q9UHX1 559 aaKnown RBP13.89□□□□□ -0.19
DDX39A-213ENST00000590315 ADAM28Q9UKQ2 775 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 ITGA11Q9UKX5 1188 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 AGAP1Q9UPQ3 857 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 NFE2L3Q9Y4A8 694 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 PLXNA3P51805 1871 aa13.89□□□□□ -0.19
DDX39A-213ENST00000590315 SF3B1O75533 1304 aaKnown RBP eCLIP13.89□□□□□ -0.192e-6■■■■■ 40.8
DDX39A-213ENST00000590315 EPOPA6NHQ4 379 aa13.88□□□□□ -0.19
DDX39A-213ENST00000590315 I3L4J1 428 aa13.88□□□□□ -0.19
DDX39A-213ENST00000590315 PPEF2O14830 753 aa13.88□□□□□ -0.19
DDX39A-213ENST00000590315 LPXNO60711 386 aa13.88□□□□□ -0.19
DDX39A-213ENST00000590315 ITGB1P05556 798 aa13.88□□□□□ -0.19
DDX39A-213ENST00000590315 BRCC3P46736 316 aa13.88□□□□□ -0.19
DDX39A-213ENST00000590315 GCLMP48507 274 aa13.88□□□□□ -0.19
DDX39A-213ENST00000590315 UPP1Q16831 310 aa13.88□□□□□ -0.19
DDX39A-213ENST00000590315 PLPP4Q5VZY2 271 aa13.88□□□□□ -0.19
DDX39A-213ENST00000590315 KIAA1841Q6NSI8 718 aa13.88□□□□□ -0.19
DDX39A-213ENST00000590315 FUT10Q6P4F1 479 aa13.88□□□□□ -0.19
DDX39A-213ENST00000590315 DCLRE1AQ6PJP8 1040 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms