RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 GATMP50440 423 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 KCNC3Q14003 757 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 BTG3Q14201 252 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-209ENST00000589941 DUSP6Q16828 381 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 KIAA0753Q2KHM9 967 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 TKFCQ3LXA3 575 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 ANKRD54Q6NXT1 300 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 CCDC62Q6P9F0 684 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 CTR9Q6PD62 1173 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 LSRQ86X29 649 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-209ENST00000589941 TP53INP2Q8IXH6 220 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 ABI1Q8IZP0 508 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 RBBP8NLQ8NC74 664 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-209ENST00000589941 LINC01599Q8WXQ3 324 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 P2RX5Q93086 422 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 ZNF689Q96CS4 500 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-209ENST00000589941 CEP95Q96GE4 821 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 NEK1Q96PY6 1258 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 SEMA4AQ9H3S1 761 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 TLE6Q9H808 572 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 SMC4Q9NTJ3 1288 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 CCPG1Q9ULG6 757 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 TNNQ9UQP3 1299 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 RWDD3Q9Y3V2 267 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 DOCK8Q8NF50 2099 aa9.02□□□□□ -0.97
SMAD4-209ENST00000589941 PTPDC1A2A3K4 754 aa9.02□□□□□ -0.97
SMAD4-209ENST00000589941 CYSRT1A8MQ03 144 aa9.02□□□□□ -0.97
SMAD4-209ENST00000589941 CALML3P27482 149 aa9.02□□□□□ -0.97
SMAD4-209ENST00000589941 TECP42680 631 aa9.02□□□□□ -0.97
SMAD4-209ENST00000589941 STAT2P52630 851 aa9.02□□□□□ -0.97
SMAD4-209ENST00000589941 PAN2Q504Q3 1202 aaKnown RBP9.02□□□□□ -0.97
SMAD4-209ENST00000589941 SLFN13Q68D06 897 aa9.02□□□□□ -0.97
SMAD4-209ENST00000589941 KCTD1Q719H9 257 aa9.02□□□□□ -0.97
SMAD4-209ENST00000589941 GMCL1P1Q8NEA9 526 aa9.02□□□□□ -0.97
SMAD4-209ENST00000589941 PPP2R3CQ969Q6 453 aa9.02□□□□□ -0.97
SMAD4-209ENST00000589941 DUSP15Q9H1R2 295 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-209ENST00000589941 ATP13A1Q9HD20 1204 aa9.02□□□□□ -0.97
SMAD4-209ENST00000589941 BPTFQ12830 3046 aa9.02□□□□□ -0.97
SMAD4-209ENST00000589941 DMXL2Q8TDJ6 3036 aa9.01□□□□□ -0.97
SMAD4-209ENST00000589941 PRDM1O75626 825 aa9.01□□□□□ -0.97
SMAD4-209ENST00000589941 BCAR3O75815 825 aa9.01□□□□□ -0.97
SMAD4-209ENST00000589941 IGHDP01880 384 aa9.01□□□□□ -0.97
SMAD4-209ENST00000589941 CT47B1P0C2W7 299 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-209ENST00000589941 SP9P0CG40 484 aa9.01□□□□□ -0.97
SMAD4-209ENST00000589941 TGM1P22735 817 aa9.01□□□□□ -0.97
SMAD4-209ENST00000589941 IKQ13123 557 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-209ENST00000589941 IGSF10Q6WRI0 2623 aa9.01□□□□□ -0.97
SMAD4-209ENST00000589941 PIWIL2Q8TC59 973 aaKnown RBP9.01□□□□□ -0.97
SMAD4-209ENST00000589941 ASB11Q8WXH4 323 aa9.01□□□□□ -0.97
SMAD4-209ENST00000589941 ASPNQ9BXN1 380 aa9.01□□□□□ -0.97
SMAD4-209ENST00000589941 SRRTQ9BXP5 876 aaKnown RBP9.01□□□□□ -0.97
SMAD4-209ENST00000589941 PARD6AQ9NPB6 346 aa9.01□□□□□ -0.97
SMAD4-209ENST00000589941 ATP8A2Q9NTI2 1148 aa9.01□□□□□ -0.97
SMAD4-209ENST00000589941 ZSWIM5Q9P217 1185 aa9.01□□□□□ -0.97
SMAD4-209ENST00000589941 ADD3Q9UEY8 706 aaKnown RBP9.01□□□□□ -0.97
SMAD4-209ENST00000589941 NOB1Q9ULX3 412 aaKnown RBP9.01□□□□□ -0.97
SMAD4-209ENST00000589941 NR2E1Q9Y466 385 aa9.01□□□□□ -0.97
SMAD4-209ENST00000589941 CNOT1A5YKK6 2376 aaKnown RBP9.01□□□□□ -0.97
SMAD4-209ENST00000589941 PLIN4Q96Q06 1357 aa9□□□□□ -0.97
SMAD4-209ENST00000589941 HELZ2Q9BYK8 2649 aaKnown RBP9□□□□□ -0.97
SMAD4-209ENST00000589941 NARSO43776 548 aaKnown RBP9□□□□□ -0.97
SMAD4-209ENST00000589941 DGKIO75912 1065 aa9□□□□□ -0.97
SMAD4-209ENST00000589941 ATF4P18848 351 aaPredicted RBP9□□□□□ -0.97
SMAD4-209ENST00000589941 RARSP54136 660 aaKnown RBP9□□□□□ -0.97
SMAD4-209ENST00000589941 ERVFC1P60507 584 aa9□□□□□ -0.97
SMAD4-209ENST00000589941 OS9Q13438 667 aaPredicted RBP9□□□□□ -0.97
SMAD4-209ENST00000589941 RPAP2Q8IXW5 612 aaPredicted RBP9□□□□□ -0.97
SMAD4-209ENST00000589941 DHX37Q8IY37 1157 aaKnown RBP9□□□□□ -0.97
SMAD4-209ENST00000589941 CLEC4DQ8WXI8 215 aa9□□□□□ -0.97
SMAD4-209ENST00000589941 UBE2FQ969M7 185 aa9□□□□□ -0.97
SMAD4-209ENST00000589941 SHDQ96IW2 340 aa9□□□□□ -0.97
SMAD4-209ENST00000589941 SEC16BQ96JE7 1060 aa9□□□□□ -0.97
SMAD4-209ENST00000589941 SLC6A18Q96N87 628 aa9□□□□□ -0.97
SMAD4-209ENST00000589941 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9□□□□□ -0.97
SMAD4-209ENST00000589941 NCDNQ9UBB6 729 aa9□□□□□ -0.97
SMAD4-209ENST00000589941 TENM4Q6N022 2769 aa9□□□□□ -0.97
SMAD4-209ENST00000589941 GOLIM4O00461 696 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 GH1P01241 217 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 ICAM1P05362 532 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 GHRP10912 638 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 MCCP23508 829 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 HOXC8P31273 242 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 CCNFP41002 786 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 GIPRP48546 466 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 DMWDQ09019 674 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 SPECC1Q5M775 1068 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 PLPP4Q5VZY2 271 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 SEPT14Q6ZU15 432 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 MAML2Q8IZL2 1156 aaPredicted RBP8.99□□□□□ -0.97
SMAD4-209ENST00000589941 TAB3Q8N5C8 712 aaPredicted RBP8.99□□□□□ -0.97
SMAD4-209ENST00000589941 TDRD5Q8NAT2 981 aaKnown RBP8.99□□□□□ -0.97
SMAD4-209ENST00000589941 STAG1Q8WVM7 1258 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 MKL1Q969V6 931 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 TM9SF2Q99805 663 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 RTP3Q9BQQ7 232 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 RTKNQ9BST9 563 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 MTMR4Q9NYA4 1195 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 LAMA1P25391 3075 aa8.99□□□□□ -0.97
SMAD4-209ENST00000589941 NAV2Q8IVL1 2488 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 UNC79Q9P2D8 2635 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms