RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 CYP46A1Q9Y6A2 500 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 KIF26AQ9ULI4 1882 aaPredicted RBP16.63■□□□□ 0.25
SF3A2-204ENST00000589118 PRRG1O14668 218 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 SLC30A4O14863 429 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 MOSPD3O75425 235 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 MED24O75448 989 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 LRG1P02750 347 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 POU2F2P09086 479 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 CCNE1P24864 410 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 OSTNP61366 133 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 SIM2Q14190 667 aaPredicted RBP16.63■□□□□ 0.25
SF3A2-204ENST00000589118 CCDC6Q16204 474 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 CALCRLQ16602 461 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 UPP1Q16831 310 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 CDCA2Q69YH5 1023 aaPredicted RBP16.63■□□□□ 0.25
SF3A2-204ENST00000589118 LAIR1Q6GTX8 287 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 CPLX2Q6PUV4 134 aaKnown RBP16.63■□□□□ 0.25
SF3A2-204ENST00000589118 TNFRSF25Q93038 417 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 RSPRY1Q96DX4 576 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 BORCS6Q96GS4 357 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 CCDC113Q9H0I3 377 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 ZFP14Q9HCL3 533 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 RAB23Q9ULC3 237 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 BACE2Q9Y5Z0 518 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 PIAS3Q9Y6X2 628 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 ZMYM2Q9UBW7 1377 aa16.63■□□□□ 0.25
SF3A2-204ENST00000589118 ABLIM3O94929 683 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 CHRNB1P11230 501 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 FAM187BQ17R55 369 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 NT5DC1Q5TFE4 455 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 PDXDC1Q6P996 788 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 Q6ZS52 159 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 CATSPER3Q86XQ3 398 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 MAP4K3Q8IVH8 894 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 ZBTB8OSQ8IWT0 167 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 ZNF461Q8TAF7 563 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 DNASE1L2Q92874 299 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 PRIMPOLQ96LW4 560 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 ASB16Q96NS5 453 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 TMEM60Q9H2L4 133 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 PDRG1Q9NUG6 133 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 CEP72Q9P209 647 aa16.62■□□□□ 0.25
SF3A2-204ENST00000589118 SDK1Q7Z5N4 2213 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 ARHGEF37A1IGU5 675 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 ACKR2O00590 384 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 MAN2B1O00754 1011 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 RETP07949 1114 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 MYL4P12829 197 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 FDPSP14324 419 aaKnown RBP16.61■□□□□ 0.25
SF3A2-204ENST00000589118 ELF1P32519 619 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 CXCL12P48061 93 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 MAPK6Q16659 721 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 PRR23CQ6ZRP0 262 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 ANKS3Q6ZW76 656 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 CELF5Q8N6W0 485 aaKnown RBP16.61■□□□□ 0.25
SF3A2-204ENST00000589118 NETO1Q8TDF5 533 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 NAP1L4Q99733 375 aaKnown RBP16.61■□□□□ 0.25
SF3A2-204ENST00000589118 FAM126AQ9BYI3 521 aaPredicted RBP16.61■□□□□ 0.25
SF3A2-204ENST00000589118 TPCN1Q9ULQ1 816 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 CHD6Q8TD26 2715 aa16.61■□□□□ 0.25
SF3A2-204ENST00000589118 CACNA1GO43497 2377 aa16.6■□□□□ 0.25
SF3A2-204ENST00000589118 SMIM28A0A1B0GU29 152 aa16.6■□□□□ 0.25
SF3A2-204ENST00000589118 BTBD18B2RXH4 712 aa16.6■□□□□ 0.25
SF3A2-204ENST00000589118 TMEM189-UBE2V1I3L0A0 370 aa16.6■□□□□ 0.25
SF3A2-204ENST00000589118 KRT2P35908 639 aa16.6■□□□□ 0.25
SF3A2-204ENST00000589118 IRF7Q92985 503 aa16.6■□□□□ 0.25
SF3A2-204ENST00000589118 ZMAT2Q96NC0 199 aaKnown RBP16.6■□□□□ 0.25
SF3A2-204ENST00000589118 MTMR9Q96QG7 549 aa16.6■□□□□ 0.25
SF3A2-204ENST00000589118 ADPGKQ9BRR6 497 aa16.6■□□□□ 0.25
SF3A2-204ENST00000589118 AVENQ9NQS1 362 aaPredicted RBP16.6■□□□□ 0.25
SF3A2-204ENST00000589118 RXFP3Q9NSD7 469 aa16.6■□□□□ 0.25
SF3A2-204ENST00000589118 ORC3Q9UBD5 711 aaPredicted RBP16.6■□□□□ 0.25
SF3A2-204ENST00000589118 INSL5Q9Y5Q6 135 aa16.6■□□□□ 0.25
SF3A2-204ENST00000589118 ATG2BQ96BY7 2078 aa16.59■□□□□ 0.25
SF3A2-204ENST00000589118 SLC38A8A6NNN8 435 aa16.59■□□□□ 0.25
SF3A2-204ENST00000589118 PSMC3P17980 439 aa16.59■□□□□ 0.25
SF3A2-204ENST00000589118 CCR3P51677 355 aa16.59■□□□□ 0.25
SF3A2-204ENST00000589118 NRLP54845 237 aa16.59■□□□□ 0.25
SF3A2-204ENST00000589118 SF3A2Q15428 464 aaKnown RBP16.59■□□□□ 0.25
SF3A2-204ENST00000589118 TEAD2Q15562 447 aa16.59■□□□□ 0.25
SF3A2-204ENST00000589118 SLC8B1Q6J4K2 584 aa16.59■□□□□ 0.25
SF3A2-204ENST00000589118 PADI6Q6TGC4 694 aa16.59■□□□□ 0.25
SF3A2-204ENST00000589118 PDZD4Q76G19 769 aaPredicted RBP16.59■□□□□ 0.25
SF3A2-204ENST00000589118 FAM177A1Q8N128 213 aaPredicted RBP16.59■□□□□ 0.25
SF3A2-204ENST00000589118 NECAB1Q8N987 351 aa16.59■□□□□ 0.25
SF3A2-204ENST00000589118 DEPTORQ8TB45 409 aa16.59■□□□□ 0.25
SF3A2-204ENST00000589118 ZSCAN18Q8TBC5 510 aaPredicted RBP16.59■□□□□ 0.25
SF3A2-204ENST00000589118 SMARCD2Q92925 531 aa16.59■□□□□ 0.25
SF3A2-204ENST00000589118 C18orf25Q96B23 403 aaPredicted RBP16.59■□□□□ 0.25
SF3A2-204ENST00000589118 FBXL5Q9UKA1 691 aa16.59■□□□□ 0.25
SF3A2-204ENST00000589118 CFAP47Q6ZTR5 3102 aa16.59■□□□□ 0.25
SF3A2-204ENST00000589118 HEPACAM2A8MVW5 462 aa16.58■□□□□ 0.24
SF3A2-204ENST00000589118 K7ESF4 209 aa16.58■□□□□ 0.24
SF3A2-204ENST00000589118 ZNF263O14978 683 aa16.58■□□□□ 0.24
SF3A2-204ENST00000589118 AXIN1O15169 862 aa16.58■□□□□ 0.24
SF3A2-204ENST00000589118 MEFVO15553 781 aaPredicted RBP16.58■□□□□ 0.24
SF3A2-204ENST00000589118 NEMFO60524 1076 aa16.58■□□□□ 0.24
SF3A2-204ENST00000589118 XRCC6P12956 609 aaKnown RBP eCLIP16.58■□□□□ 0.24
SF3A2-204ENST00000589118 ATF2P15336 505 aa16.58■□□□□ 0.24
SF3A2-204ENST00000589118 XBP1P17861 261 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms