RNA–Protein interactions for RNA: ENST00000587708.6

PSENEN-202, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 1,661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-202ENST00000587708 ARHGEF6Q15052 776 aa18.79■□□□□ 0.6
PSENEN-202ENST00000587708 KIZQ2M2Z5 673 aa18.79■□□□□ 0.6
PSENEN-202ENST00000587708 SLC27A1Q6PCB7 646 aa18.79■□□□□ 0.6
PSENEN-202ENST00000587708 TRIM72Q6ZMU5 477 aa18.79■□□□□ 0.6
PSENEN-202ENST00000587708 CATSPER4Q7RTX7 472 aa18.79■□□□□ 0.6
PSENEN-202ENST00000587708 CTAGE6Q86UF2 777 aa18.79■□□□□ 0.6
PSENEN-202ENST00000587708 SLC47A2Q86VL8 602 aa18.79■□□□□ 0.6
PSENEN-202ENST00000587708 CTAGE4Q8IX94 777 aa18.79■□□□□ 0.6
PSENEN-202ENST00000587708 CCDC94Q9BW85 323 aaPredicted RBP18.79■□□□□ 0.6
PSENEN-202ENST00000587708 ARHGAP39Q9C0H5 1083 aa18.79■□□□□ 0.6
PSENEN-202ENST00000587708 MTMR12Q9C0I1 747 aa18.79■□□□□ 0.6
PSENEN-202ENST00000587708 FAM49AQ9H0Q0 323 aaPredicted RBP18.79■□□□□ 0.6
PSENEN-202ENST00000587708 MROH7Q68CQ1 1323 aa18.78■□□□□ 0.6
PSENEN-202ENST00000587708 CES2O00748 559 aa18.78■□□□□ 0.6
PSENEN-202ENST00000587708 PALMO75781 387 aa18.78■□□□□ 0.6
PSENEN-202ENST00000587708 TBC1D8O95759 1140 aa18.78■□□□□ 0.6
PSENEN-202ENST00000587708 CST3P01034 146 aaPredicted RBP18.78■□□□□ 0.6
PSENEN-202ENST00000587708 CHRNB2P17787 502 aa18.78■□□□□ 0.6
PSENEN-202ENST00000587708 ACO1P21399 889 aaKnown RBP18.78■□□□□ 0.6
PSENEN-202ENST00000587708 CHMP4BP1P59074 171 aa18.78■□□□□ 0.6
PSENEN-202ENST00000587708 GPC5P78333 572 aa18.78■□□□□ 0.6
PSENEN-202ENST00000587708 RSRC2Q7L4I2 434 aaKnown RBP18.78■□□□□ 0.6
PSENEN-202ENST00000587708 MTERF4Q7Z6M4 381 aaKnown RBP18.78■□□□□ 0.6
PSENEN-202ENST00000587708 RSPH3Q86UC2 560 aa18.78■□□□□ 0.6
PSENEN-202ENST00000587708 DDX1Q92499 740 aaKnown RBP18.78■□□□□ 0.6
PSENEN-202ENST00000587708 ANKRD7Q92527 254 aa18.78■□□□□ 0.6
PSENEN-202ENST00000587708 RABGGTAQ92696 567 aa18.78■□□□□ 0.6
PSENEN-202ENST00000587708 LENG1Q96BZ8 264 aaPredicted RBP18.78■□□□□ 0.6
PSENEN-202ENST00000587708 NIF3L1Q9GZT8 377 aa18.78■□□□□ 0.6
PSENEN-202ENST00000587708 VRTNQ9H8Y1 702 aa18.78■□□□□ 0.6
PSENEN-202ENST00000587708 APOBEC3GQ9HC16 384 aaKnown RBP18.78■□□□□ 0.6
PSENEN-202ENST00000587708 HDAC6Q9UBN7 1215 aa18.78■□□□□ 0.6
PSENEN-202ENST00000587708 LACTBL1A8MY62 500 aa18.77■□□□□ 0.6
PSENEN-202ENST00000587708 AOC2O75106 756 aa18.77■□□□□ 0.6
PSENEN-202ENST00000587708 FTLP02792 175 aaPredicted RBP18.77■□□□□ 0.6
PSENEN-202ENST00000587708 TUBBP07437 444 aa18.77■□□□□ 0.6
PSENEN-202ENST00000587708 CXCL8P10145 99 aa18.77■□□□□ 0.6
PSENEN-202ENST00000587708 CST5P28325 142 aaPredicted RBP18.77■□□□□ 0.6
PSENEN-202ENST00000587708 FMO1Q01740 532 aa18.77■□□□□ 0.6
PSENEN-202ENST00000587708 ITIH3Q06033 890 aa18.77■□□□□ 0.6
PSENEN-202ENST00000587708 CACNB2Q08289 660 aaPredicted RBP18.77■□□□□ 0.6
PSENEN-202ENST00000587708 MEI1Q5TIA1 1274 aa18.77■□□□□ 0.6
PSENEN-202ENST00000587708 SLFN11Q7Z7L1 901 aa18.77■□□□□ 0.6
PSENEN-202ENST00000587708 GPR161Q8N6U8 529 aaKnown RBP18.77■□□□□ 0.6
PSENEN-202ENST00000587708 TPCN2Q8NHX9 752 aa18.77■□□□□ 0.6
PSENEN-202ENST00000587708 SLC20A1Q8WUM9 679 aa18.77■□□□□ 0.6
PSENEN-202ENST00000587708 DNAJB3Q8WWF6 145 aa18.77■□□□□ 0.6
PSENEN-202ENST00000587708 CPB2Q96IY4 423 aa18.77■□□□□ 0.6
PSENEN-202ENST00000587708 NUB1Q9Y5A7 615 aa18.77■□□□□ 0.6
PSENEN-202ENST00000587708 TREHO43280 583 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 STAU1O95793 577 aaKnown RBP18.76■□□□□ 0.59
PSENEN-202ENST00000587708 P4HA1P13674 534 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 OSTNP61366 133 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 SLC10A6Q3KNW5 377 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 RPAINQ86UA6 219 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 SESTD1Q86VW0 696 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 EFCAB13Q8IY85 973 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 TTC39CQ8N584 583 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 TRIM11Q96F44 468 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 SRRDQ9UH36 339 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 PCDHB4Q9Y5E5 795 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 GRID2IPA4D2P6 1211 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 CSDE1O75534 798 aaKnown RBP18.76■□□□□ 0.59
PSENEN-202ENST00000587708 HOXA11P31270 313 aaPredicted RBP18.76■□□□□ 0.59
PSENEN-202ENST00000587708 MYL6P60660 151 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 ZNF699Q32M78 642 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 ACAD10Q6JQN1 1059 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 RUFY4Q6ZNE9 571 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 UBR7Q8N806 425 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 CEP120Q8N960 986 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 LRRC57Q8N9N7 239 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 PCSK9Q8NBP7 692 aaKnown RBP18.76■□□□□ 0.59
PSENEN-202ENST00000587708 SLC35G2Q8TBE7 412 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 PXYLP1Q8TE99 480 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 PPP1R16BQ96T49 567 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 TLR10Q9BXR5 811 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.76■□□□□ 0.591e-7■■■■■ 115.4
PSENEN-202ENST00000587708 GTF2IRD1Q9UHL9 959 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 ITGA11Q9UKX5 1188 aa18.76■□□□□ 0.59
PSENEN-202ENST00000587708 M0QZ92 97 aa18.75■□□□□ 0.59
PSENEN-202ENST00000587708 MTA2O94776 668 aa18.75■□□□□ 0.59
PSENEN-202ENST00000587708 MMEP08473 750 aa18.75■□□□□ 0.59
PSENEN-202ENST00000587708 MYBL1P10243 752 aa18.75■□□□□ 0.59
PSENEN-202ENST00000587708 YARSP54577 528 aaKnown RBP18.75■□□□□ 0.59
PSENEN-202ENST00000587708 TMEM132DQ14C87 1099 aa18.75■□□□□ 0.59
PSENEN-202ENST00000587708 SNX17Q15036 470 aa18.75■□□□□ 0.59
PSENEN-202ENST00000587708 ERCC6LQ2NKX8 1250 aa18.75■□□□□ 0.59
PSENEN-202ENST00000587708 SPOPLQ6IQ16 392 aa18.75■□□□□ 0.59
PSENEN-202ENST00000587708 ZNF572Q7Z3I7 529 aaPredicted RBP18.75■□□□□ 0.59
PSENEN-202ENST00000587708 CDR2LQ86X02 465 aaPredicted RBP18.75■□□□□ 0.59
PSENEN-202ENST00000587708 KLHDC9Q8NEP7 349 aa18.75■□□□□ 0.59
PSENEN-202ENST00000587708 OSBPL9Q96SU4 736 aa18.75■□□□□ 0.59
PSENEN-202ENST00000587708 XYLT2Q9H1B5 865 aa18.75■□□□□ 0.59
PSENEN-202ENST00000587708 XPNPEP3Q9NQH7 507 aa18.75■□□□□ 0.59
PSENEN-202ENST00000587708 ADAMTS4O75173 837 aa18.74■□□□□ 0.59
PSENEN-202ENST00000587708 CABYRO75952 493 aa18.74■□□□□ 0.59
PSENEN-202ENST00000587708 HMGCRP04035 888 aa18.74■□□□□ 0.59
PSENEN-202ENST00000587708 PAFAH1B1P43034 410 aa18.74■□□□□ 0.59
PSENEN-202ENST00000587708 ZNF132P52740 706 aa18.74■□□□□ 0.59
PSENEN-202ENST00000587708 PRMT2P55345 433 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms