RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 MCAMP43121 646 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 CHN2P52757 468 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 MXRA7P84157 204 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 SRSF2Q01130 221 aaKnown RBP5.72□□□□□ -1.49
VMP1-205ENST00000587470 GUCY1B3Q02153 619 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 PPP3CAQ08209 521 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 MALLQ13021 153 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 AGAP9Q5VTM2 703 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 LHFPL2Q6ZUX7 228 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 SPATS2Q86XZ4 545 aaKnown RBP5.72□□□□□ -1.49
VMP1-205ENST00000587470 PQLC1Q8N2U9 271 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 CPEB3Q8NE35 698 aaKnown RBP5.72□□□□□ -1.49
VMP1-205ENST00000587470 SUPT20HQ8NEM7 779 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 CRAMP1Q96RY5 1269 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 DNAJC28Q9NX36 388 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 ATP11BQ9Y2G3 1177 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 PRKAB1Q9Y478 270 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 PCSK5Q92824 1860 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 CPS1P31327 1500 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 FYCO1Q9BQS8 1478 aa5.71□□□□□ -1.49
VMP1-205ENST00000587470 PRKD3O94806 890 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 LMNAP02545 664 aaKnown RBP5.71□□□□□ -1.5
VMP1-205ENST00000587470 GSPT1P15170 499 aaKnown RBP5.71□□□□□ -1.5
VMP1-205ENST00000587470 DDX6P26196 483 aaKnown RBP eCLIP5.71□□□□□ -1.5
VMP1-205ENST00000587470 AVPR1BP47901 424 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 NOMO1Q15155 1222 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 AFMIDQ63HM1 303 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 ARMC6Q6NXE6 501 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 Q6YL49 198 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 RHOT2Q8IXI1 618 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 BEND2Q8NDZ0 799 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 HOXB13Q92826 284 aaPredicted RBP5.71□□□□□ -1.5
VMP1-205ENST00000587470 PHACTR3Q96KR7 559 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 COQ10AQ96MF6 247 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 NEU1Q99519 415 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 ADI1Q9BV57 179 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 LANCL2Q9NS86 450 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 FAM30AQ9NZY2 134 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 TROQ12816 1431 aaPredicted RBP5.71□□□□□ -1.5
VMP1-205ENST00000587470 VPS8Q8N3P4 1428 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 CFAP74Q9C0B2 1584 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 LRRIQ1Q96JM4 1722 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 PLA2R1Q13018 1463 aa5.71□□□□□ -1.5
VMP1-205ENST00000587470 C3P01024 1663 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 PIPSLA2A3N6 862 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 MARCH11A6NNE9 402 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 ENDOD1O94919 500 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 CFIP05156 583 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 GUCY1A2P33402 732 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 MTNR1BP49286 362 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 RESTQ13127 1097 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 MED25Q71SY5 747 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 DRC7Q8IY82 874 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 FBXO18Q8NFZ0 1043 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 STON2Q8WXE9 905 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 MRI1Q9BV20 369 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 SENP6Q9GZR1 1112 aaPredicted RBP5.7□□□□□ -1.5
VMP1-205ENST00000587470 REXO4Q9GZR2 422 aaKnown RBP5.7□□□□□ -1.5
VMP1-205ENST00000587470 DMRT3Q9NQL9 472 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 CCM2LQ9NUG4 571 aaPredicted RBP5.7□□□□□ -1.5
VMP1-205ENST00000587470 SYBUQ9NX95 663 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 HECW1Q76N89 1606 aa5.7□□□□□ -1.5
VMP1-205ENST00000587470 UNC119BA6NIH7 251 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 K7ESF4 209 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 WNT10BO00744 389 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 NUDT3O95989 172 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 POMCP01189 267 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 RAP2AP10114 183 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 ATP5JP18859 108 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 RAP2BP61225 183 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 ERVK-21P61565 698 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 BLOC1S1P78537 153 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 ABHD17BQ5VST6 288 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 TSHZ3Q63HK5 1081 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 OTUD7BQ6GQQ9 843 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 CMTR2Q8IYT2 770 aaKnown RBP5.69□□□□□ -1.5
VMP1-205ENST00000587470 OR56A1Q8NGH5 318 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 ATL2Q8NHH9 583 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 CASKIN2Q8WXE0 1202 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 CYFIP2Q96F07 1278 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 ADAM2Q99965 735 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 TMEM140Q9NV12 185 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 KLHL11Q9NVR0 708 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 MAP3K2Q9Y2U5 619 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 PCDHGA2Q9Y5H1 932 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 CCDC18Q5T9S5 1454 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 SHANK2Q9UPX8 1470 aa5.69□□□□□ -1.5
VMP1-205ENST00000587470 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.69□□□□□ -1.5
VMP1-205ENST00000587470 NPATQ14207 1427 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 SPDEFO95238 335 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 HKR1P10072 659 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 UBXN2BQ14CS0 331 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 SPDYE7PQ495Y7 208 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 OLFML1Q6UWY5 402 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 MAPKAPK5Q8IW41 473 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.68□□□□□ -1.5
VMP1-205ENST00000587470 LINC00476Q8WZB0 136 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 CAVIN3Q969G5 261 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 FUBP3Q96I24 572 aaKnown RBP eCLIP5.68□□□□□ -1.5
VMP1-205ENST00000587470 RIOX1Q9H6W3 641 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms