RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 ASB7Q9H672 318 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 PAK5Q9P286 719 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 SNED1Q8TER0 1413 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 UNCXA6NJT0 531 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 SFI1A8K8P3 1242 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 CYP26A1O43174 497 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 ZMYND10O75800 440 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 CPP00450 1065 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 CYP11B1P15538 503 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 ERCC3P19447 782 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 COMTP21964 271 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 CNTFP26441 200 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 NCOA4Q13772 614 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 ZNF568Q3ZCX4 644 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 AGGF1Q8N302 714 aaeCLIP6.2□□□□□ -1.42
RTTN-209ENST00000583043 BBS5Q8N3I7 341 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 TMEM174Q8WUU8 243 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 INPP4AQ96PE3 977 aaPredicted RBP6.2□□□□□ -1.42
RTTN-209ENST00000583043 CCT8L2Q96SF2 557 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 SIKE1Q9BRV8 207 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 Q9H521 79 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 AMACRQ9UHK6 382 aa6.2□□□□□ -1.42
RTTN-209ENST00000583043 OPLAHO14841 1288 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 ZBED1O96006 694 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 GH1P01241 217 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 EIF4BP23588 611 aaKnown RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 HSD17B3P37058 310 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 NPTX2P47972 431 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 KRT17Q04695 432 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 IZUMO3Q5VZ72 239 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 SEPT14Q6ZU15 432 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 TRMT1LQ7Z2T5 733 aaKnown RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 SHC3Q92529 594 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 OSBPL8Q9BZF1 889 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 DRG1Q9Y295 367 aaKnown RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 NPHP3-ACAD11A0A0J9YXS1 232 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 HSPA8P11142 646 aaKnown RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 HSPA1LP34931 641 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 PDCLQ13371 301 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 NAB1Q13506 487 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 VSIG10LQ86VR7 867 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 FAM71AQ8IYT1 594 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 ZNF473Q8WTR7 871 aaKnown RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 ATXN2LQ8WWM7 1075 aaKnown RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 CASKIN2Q8WXE0 1202 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 KLHL29Q96CT2 875 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 C12orf42Q96LP6 360 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 KATNAL1Q9BW62 490 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 BRD8Q9H0E9 1235 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 SSX2IPQ9Y2D8 614 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 ASTN1O14525 1302 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 ANKRD36CQ5JPF3 1778 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 PPFIA2O75334 1257 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 WEE2P0C1S8 567 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 SPATA31C1P0DKV0 1188 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 MCF2P10911 925 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 PTGER2P43116 358 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 ACTR2P61160 394 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 NOP14P78316 857 aaKnown RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 MTMR2Q13614 643 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 COL9A3Q14050 684 aaPredicted RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 P3H1Q32P28 736 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 SH2D4BQ5SQS7 431 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 DARS2Q6PI48 645 aaKnown RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 METTL7BQ6UX53 244 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 CEP57Q86XR8 500 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 C11orf70Q9BRQ4 267 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 XAB2Q9HCS7 855 aaKnown RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 BATF3Q9NR55 127 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 DMAC2Q9NW81 257 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 ERAP1Q9NZ08 941 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 PSMC3IPQ9P2W1 217 aaPredicted RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 PABPN1LA6NDY0 278 aaKnown RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 CCDC22O60826 627 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 GCLCP48506 637 aaPredicted RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 KCNMA1Q12791 1236 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 SPATA24Q86W54 205 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 MICALL2Q8IY33 904 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 KATNAL2Q8IYT4 538 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 ABRAQ8N0Z2 381 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 CERS5Q8N5B7 392 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 ARHGEF26Q96DR7 871 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 PITPNM3Q9BZ71 974 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 KDM4CQ9H3R0 1056 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 LRRC19Q9H756 370 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 GOLGA8IPA6NC78 632 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 GOLGA8JA6NMD2 632 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 FOXN3O00409 490 aaPredicted RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 DDX3XO00571 662 aaKnown RBP eCLIP6.19□□□□□ -1.42
RTTN-209ENST00000583043 VDRP11473 427 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 KRT3P12035 628 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 MAP2K2P36507 400 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 CARSP49589 748 aaKnown RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 ZNF268Q14587 947 aaPredicted RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 NAA35Q5VZE5 725 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 POLNQ7Z5Q5 900 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 BRSK2Q8IWQ3 736 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 ANKRD42Q8N9B4 389 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 C12orf50Q8NA57 414 aaPredicted RBP6.19□□□□□ -1.42
RTTN-209ENST00000583043 SHCBP1Q8NEM2 672 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms