RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	DERA	Q9Y315	318 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	HCN4	Q9Y3Q4	1203 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	PCDHB13	Q9Y5F0	798 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	PLXNA3	P51805	1871 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	PDCD11	Q14690	1871 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	FRMD3	A2A2Y4	597 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	MYMK	A6NI61	221 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708		H7C4K7	107 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	FAM189A1	O60320	539 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	PPP1R37	O75864	691 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	F13A1	P00488	732 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	HARS	P12081	509 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	LRPAP1	P30533	357 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	LIN9	Q5TKA1	542 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CD300LG	Q6UXG3	332 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	PALB2	Q86YC2	1186 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	IQUB	Q8NA54	791 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	APPL2	Q8NEU8	664 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	NXPE3	Q969Y0	559 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	SUSD3	Q96L08	255 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	MFSD14A	Q96MC6	490 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	PYM1	Q9BRP8	204 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	MSTO1	Q9BUK6	570 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	HAPLN2	Q9GZV7	340 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	ASB7	Q9H672	318 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	RPF1	Q9H9Y2	349 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	TSHZ2	Q9NRE2	1034 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	FBXW11	Q9UKB1	542 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CPSF3	Q9UKF6	684 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	SORCS3	Q9UPU3	1222 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	NUB1	Q9Y5A7	615 aa		13.71	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	C2CD4D	B7Z1M9	353 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	MEFV	O15553	781 aa	Predicted RBP	13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	CXCL8	P10145	99 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	NMT1	P30419	496 aa	Known RBP	13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	SIGLEC14	Q08ET2	396 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	MTMR3	Q13615	1198 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	SLC8B1	Q6J4K2	584 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	CNNM4	Q6P4Q7	775 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	STXBP4	Q6ZWJ1	553 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	DYM	Q7RTS9	669 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	SFR1	Q86XK3	245 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	CCDC65	Q8IXS2	484 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	C3orf58	Q8NDZ4	430 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	SMG7	Q92540	1137 aa	Known RBP	13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	C18orf25	Q96B23	403 aa	Predicted RBP	13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	ZNF707	Q96C28	371 aa	Predicted RBP	13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	ACCS	Q96QU6	501 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	MRPL44	Q9H9J2	332 aa	Known RBP	13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	GOLGA2P5	Q9HBQ8	144 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	KBTBD4	Q9NVX7	518 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	VWA8	A3KMH1	1905 aa		13.7	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	CLUH	O75153	1309 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	ARHGEF37	A1IGU5	675 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	TBC1D4	O60343	1298 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	XYLB	O75191	536 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	WEE2	P0C1S8	567 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	RPL17	P18621	184 aa	Known RBP	13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	OR1D2	P34982	312 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	MRPL58	Q14197	206 aa	Known RBP	13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	ENOX2	Q16206	610 aa	Known RBP	13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	E2F4	Q16254	413 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	L1TD1	Q5T7N2	865 aa	Known RBP	13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	TPGS2	Q68CL5	300 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	KANK3	Q6NY19	840 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	SLC39A4	Q6P5W5	647 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	NT5DC4	Q86YG4	428 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	ZNF461	Q8TAF7	563 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	KIF12	Q96FN5	646 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	TMEM206	Q9H813	350 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	PIDD1	Q9HB75	910 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	IGSF9	Q9P2J2	1179 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	TFIP11	Q9UBB9	837 aa	Known RBP	13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	CDH22	Q9UJ99	828 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	C2CD2	Q9Y426	696 aa		13.69	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	TECTA	O75443	2155 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708		A0A087X0B3	334 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	FAM86C2P	A6NEL3	165 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	TMEM221	A6NGB7	291 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	LACTBL1	A8MY62	500 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708		M0QZQ0	153 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708		M0R296	226 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	KIAA0391	O15091	583 aa	Known RBP	13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	RFPL2	O75678	378 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	IL18RAP	O95256	599 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	LDHA	P00338	332 aa	Known RBP	13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	C8A	P07357	584 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	IDE	P14735	1019 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	GART	P22102	1010 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	TKT	P29401	623 aa	Known RBP	13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	TNFSF9	P41273	254 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	BRCC3	P46736	316 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	AARS	P49588	968 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	SEZ6	Q53EL9	994 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	PPM1L	Q5SGD2	360 aa		13.68	□□□□□ -0.22
CDK5RAP3-222	ENST00000581708	VARS2	Q5ST30	1063 aa	Known RBP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms