RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	SMIM10L2B	P0DMW5	78 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	CYP2C9	P11712	490 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	HARS	P12081	509 aa	Known RBP	10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	YARS	P54577	528 aa	Known RBP	10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	NKX3-2	P78367	333 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	CAP1	Q01518	475 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	BRD3	Q15059	726 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	FSCN1	Q16658	493 aa	Known RBP	10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	ERCC6L	Q2NKX8	1250 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	MAP9	Q49MG5	647 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	GJC2	Q5T442	439 aa	Predicted RBP	10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	LIN9	Q5TKA1	542 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	ACAD10	Q6JQN1	1059 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	NOTUM	Q6P988	496 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	FBXO46	Q6PJ61	603 aa	Predicted RBP	10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	PEX26	Q7Z412	305 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	SLFN11	Q7Z7L1	901 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	RPUSD2	Q8IZ73	545 aa	Known RBP	10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	C7orf31	Q8N865	590 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	ZSWIM2	Q8NEG5	633 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	TPCN2	Q8NHX9	752 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	KREMEN1	Q96MU8	473 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	ACAP3	Q96P50	834 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	OSBPL9	Q96SU4	736 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	MTG1	Q9BT17	334 aa	Predicted RBP	10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	ZNF518B	Q9C0D4	1074 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	CDT1	Q9H211	546 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	CYP3A43	Q9HB55	503 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	NOCT	Q9UK39	431 aa	Known RBP	10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	KIAA1257	Q9ULG3	409 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	CEP83	Q9Y592	693 aa		10.64	□□□□□ -0.71
TRIM16-222	ENST00000581224	CIT	O14578	2027 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224		A0A0U1RQJ8	604 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	C17orf102	A2RUQ5	167 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	ABLIM1	O14639	778 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	ENC1	O14682	589 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	MED7	O43513	233 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	BUB1	O43683	1085 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	CLSTN1	O94985	981 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	STAU1	O95793	577 aa	Known RBP	10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	MYL3	P08590	195 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	STAG3L1	P0CL83	205 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	CYP2C19	P33261	490 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	GRM5	P41594	1212 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	GJA9	P57773	515 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	NOP14	P78316	857 aa	Known RBP	10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	TEX35	Q5T0J7	233 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	MARCH8	Q5T0T0	291 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	SLC27A1	Q6PCB7	646 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	CATSPER4	Q7RTX7	472 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	DAAM2	Q86T65	1068 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	THNSL1	Q8IYQ7	743 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	HACE1	Q8IYU2	909 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	MSANTD4	Q8NCY6	345 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	LNX1	Q8TBB1	728 aa	Predicted RBP	10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	SLC35G2	Q8TBE7	412 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	RAET1E	Q8TD07	263 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	ATRIP	Q8WXE1	791 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	FAM212A	Q96EL1	285 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	RPS6KC1	Q96S38	1066 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	NIF3L1	Q9GZT8	377 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	HAPLN2	Q9GZV7	340 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	VRTN	Q9H8Y1	702 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	MRPL47	Q9HD33	250 aa	Known RBP	10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	AVEN	Q9NQS1	362 aa	Predicted RBP	10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	SETD4	Q9NVD3	440 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	AJAP1	Q9UKB5	411 aa	Predicted RBP	10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	GTF3C4	Q9UKN8	822 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	ITGA11	Q9UKX5	1188 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	PCDHB4	Q9Y5E5	795 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	CAPN6	Q9Y6Q1	641 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	ANK1	P16157	1881 aa		10.63	□□□□□ -0.71
TRIM16-222	ENST00000581224	CCDC151	A5D8V7	595 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	FANCG	O15287	622 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	SEPT4	O43236	478 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	SGPL1	O95470	568 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	VNN1	O95497	513 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	LSM8	O95777	96 aa	Known RBP	10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	MYC	P01106	439 aa	Predicted RBP	10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	VTN	P04004	478 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	RARB	P10826	455 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	ARF4	P18085	180 aa	Predicted RBP	10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	EIF4B	P23588	611 aa	Known RBP	10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	CTGF	P29279	349 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	NSF	P46459	744 aa	Known RBP	10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	CRYBB1	P53674	252 aa	Predicted RBP	10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	RBP5	P82980	135 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	TFAM	Q00059	246 aa	Known RBP	10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	MYO1E	Q12965	1108 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	ELF2	Q15723	593 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	AMHR2	Q16671	573 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	ZNF699	Q32M78	642 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	ZNF667	Q5HYK9	610 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	TMEM63B	Q5T3F8	832 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	C11orf63	Q6NUN7	778 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	TMCO3	Q6UWJ1	677 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	MMGT1	Q8N4V1	131 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	UBL4B	Q8N7F7	174 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	PCSK9	Q8NBP7	692 aa	Known RBP	10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms