RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 MPP4Q96JB8 637 aa4.67□□□□□ -1.66
SMG8-205ENST00000580798 ZNF830Q96NB3 372 aaPredicted RBP4.67□□□□□ -1.66
SMG8-205ENST00000580798 GPR101Q96P66 508 aaPredicted RBP4.67□□□□□ -1.66
SMG8-205ENST00000580798 ORAI3Q9BRQ5 295 aa4.67□□□□□ -1.66
SMG8-205ENST00000580798 NDC1Q9BTX1 674 aa4.67□□□□□ -1.66
SMG8-205ENST00000580798 SELENOOQ9BVL4 669 aa4.67□□□□□ -1.66
SMG8-205ENST00000580798 SPATA5L1Q9BVQ7 753 aa4.67□□□□□ -1.66
SMG8-205ENST00000580798 RANBP17Q9H2T7 1088 aaKnown RBP4.67□□□□□ -1.66
SMG8-205ENST00000580798 ALG13Q9NP73 1137 aaKnown RBP4.67□□□□□ -1.66
SMG8-205ENST00000580798 AKIP1Q9NQ31 210 aa4.67□□□□□ -1.66
SMG8-205ENST00000580798 TMEM260Q9NX78 707 aa4.67□□□□□ -1.66
SMG8-205ENST00000580798 CLIC5Q9NZA1 410 aa4.67□□□□□ -1.66
SMG8-205ENST00000580798 TRPM5Q9NZQ8 1165 aa4.67□□□□□ -1.66
SMG8-205ENST00000580798 RNF7Q9UBF6 113 aa4.67□□□□□ -1.66
SMG8-205ENST00000580798 ZKSCAN5Q9Y2L8 839 aa4.67□□□□□ -1.66
SMG8-205ENST00000580798 PPP2R3BQ9Y5P8 575 aa4.67□□□□□ -1.66
SMG8-205ENST00000580798 MYPNQ86TC9 1320 aa4.67□□□□□ -1.66
SMG8-205ENST00000580798 IPO5O00410 1097 aaKnown RBP4.66□□□□□ -1.66
SMG8-205ENST00000580798 RNASET2O00584 256 aaKnown RBP4.66□□□□□ -1.66
SMG8-205ENST00000580798 ORC4O43929 436 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 GAS7O60861 476 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 TCEA3O75764 348 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 LY86O95711 162 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 F2P00734 622 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 CCDC175P0C221 793 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 NBPF7P0C2Y1 421 aaPredicted RBP4.66□□□□□ -1.66
SMG8-205ENST00000580798 HKR1P10072 659 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 CNGA1P29973 690 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 CASRP41180 1078 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 SATB1Q01826 763 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 DSG1Q02413 1049 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 CD69Q07108 199 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 LRRC32Q14392 662 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 ANO1Q5XXA6 986 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 GDF7Q7Z4P5 450 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 ZNF354CQ86Y25 554 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 SUGP1Q8IWZ8 645 aaKnown RBP4.66□□□□□ -1.66
SMG8-205ENST00000580798 EFHBQ8N7U6 833 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 CDYL2Q8N8U2 506 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 SCARB1Q8WTV0 552 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 CHTF18Q8WVB6 975 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 PAWRQ96IZ0 340 aaKnown RBP4.66□□□□□ -1.66
SMG8-205ENST00000580798 RNPC3Q96LT9 517 aaKnown RBP4.66□□□□□ -1.66
SMG8-205ENST00000580798 PDCD2LQ9BRP1 358 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 EPC1Q9H2F5 836 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 FANCLQ9NW38 375 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 THG1LQ9NWX6 298 aaKnown RBP4.66□□□□□ -1.66
SMG8-205ENST00000580798 PCDHB6Q9Y5E3 794 aa4.66□□□□□ -1.66
SMG8-205ENST00000580798 CENPJQ9HC77 1338 aaPredicted RBP4.66□□□□□ -1.66
SMG8-205ENST00000580798 FAM83GA6ND36 823 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 TRIM64CA6NLI5 447 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 IPO8O15397 1037 aaKnown RBP4.65□□□□□ -1.67
SMG8-205ENST00000580798 TGM5O43548 720 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 HTATSF1O43719 755 aaKnown RBP4.65□□□□□ -1.67
SMG8-205ENST00000580798 NDUFA10O95299 355 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 PFKMP08237 780 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 TGFB3P10600 412 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 CTGFP29279 349 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 SH3BGRP55822 239 aaPredicted RBP4.65□□□□□ -1.67
SMG8-205ENST00000580798 NUCB1Q02818 461 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 MORC3Q14149 939 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 SIM2Q14190 667 aaPredicted RBP4.65□□□□□ -1.67
SMG8-205ENST00000580798 TOMM20Q15388 145 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 PUM3Q15397 648 aaKnown RBP4.65□□□□□ -1.67
SMG8-205ENST00000580798 NFE2Q16621 373 aaPredicted RBP4.65□□□□□ -1.67
SMG8-205ENST00000580798 BEAN1Q3B7T3 259 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 HYIQ5T013 277 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 OTUD6AQ7L8S5 288 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 HOMER1Q86YM7 354 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 ARL6IP6Q8N6S5 226 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 ANKRD42Q8N9B4 389 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 ACRBPQ8NEB7 543 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 OR5M3Q8NGP4 307 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 FERMT2Q96AC1 680 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 SKA1Q96BD8 255 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 SCLT1Q96NL6 688 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 FDXACB1Q9BRP7 624 aaPredicted RBP4.65□□□□□ -1.67
SMG8-205ENST00000580798 LSM14BQ9BX40 385 aaKnown RBP4.65□□□□□ -1.67
SMG8-205ENST00000580798 INTS7Q9NVH2 962 aaKnown RBP4.65□□□□□ -1.67
SMG8-205ENST00000580798 MSRAQ9UJ68 235 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 USP18Q9UMW8 372 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 CHST2Q9Y4C5 530 aa4.65□□□□□ -1.67
SMG8-205ENST00000580798 ST20-MTHFSA0A0A6YYL1 179 aa4.64□□□□□ -1.67
SMG8-205ENST00000580798 GAGE12BA1L429 117 aa4.64□□□□□ -1.67
SMG8-205ENST00000580798 LCHNA4D1U4 455 aa4.64□□□□□ -1.67
SMG8-205ENST00000580798 GAGE12HA6NDE8 117 aa4.64□□□□□ -1.67
SMG8-205ENST00000580798 ALG1L2C9J202 215 aa4.64□□□□□ -1.67
SMG8-205ENST00000580798 PRRT4C9JH25 899 aa4.64□□□□□ -1.67
SMG8-205ENST00000580798 LEFTY2O00292 366 aa4.64□□□□□ -1.67
SMG8-205ENST00000580798 SEC24DO94855 1032 aaPredicted RBP4.64□□□□□ -1.67
SMG8-205ENST00000580798 CCDC159P0C7I6 412 aa4.64□□□□□ -1.67
SMG8-205ENST00000580798 DDIT3P35638 169 aa4.64□□□□□ -1.67
SMG8-205ENST00000580798 NEK4P51957 841 aa4.64□□□□□ -1.67
SMG8-205ENST00000580798 EIF5P55010 431 aaKnown RBP4.64□□□□□ -1.67
SMG8-205ENST00000580798 MRPL49Q13405 166 aaKnown RBP4.64□□□□□ -1.67
SMG8-205ENST00000580798 KIF22Q14807 665 aa4.64□□□□□ -1.67
SMG8-205ENST00000580798 C21orf62-AS1Q17RA5 79 aa4.64□□□□□ -1.67
SMG8-205ENST00000580798 SPECC1Q5M775 1068 aa4.64□□□□□ -1.67
SMG8-205ENST00000580798 CPLX2Q6PUV4 134 aaKnown RBP4.64□□□□□ -1.67
SMG8-205ENST00000580798 ESPNLQ6ZVH7 1005 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms