RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 HCFC1R1Q9NWW0 138 aa19.13■□□□□ 0.65
CSNK1D-214ENST00000580565 SYN3O14994 580 aa19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 CLDN3O15551 220 aa19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 SLC26A4O43511 780 aa19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 RFX1P22670 979 aa19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 MCL1Q07820 350 aa19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 NOLC1Q14978 699 aaKnown RBP eCLIP19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 PABPC1LQ4VXU2 614 aaKnown RBP19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 SEZ6Q53EL9 994 aa19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 LARP1BQ659C4 914 aaKnown RBP19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 ZNF461Q8TAF7 563 aa19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 TBC1D17Q9HA65 648 aa19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 LARSQ9P2J5 1176 aaKnown RBP19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 DNMT3BQ9UBC3 853 aaKnown RBP19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 KCNH3Q9ULD8 1083 aa19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 NUB1Q9Y5A7 615 aa19.12■□□□□ 0.65
CSNK1D-214ENST00000580565 H0YCG3 227 aa19.11■□□□□ 0.65
CSNK1D-214ENST00000580565 H7C4K7 107 aa19.11■□□□□ 0.65
CSNK1D-214ENST00000580565 TBC1D4O60343 1298 aa19.11■□□□□ 0.65
CSNK1D-214ENST00000580565 ABLIM3O94929 683 aa19.11■□□□□ 0.65
CSNK1D-214ENST00000580565 ROR1Q01973 937 aa19.11■□□□□ 0.65
CSNK1D-214ENST00000580565 CACNB1Q02641 598 aaPredicted RBP19.11■□□□□ 0.65
CSNK1D-214ENST00000580565 MRPL58Q14197 206 aaKnown RBP19.11■□□□□ 0.65
CSNK1D-214ENST00000580565 PHLDB3Q6NSJ2 640 aa19.11■□□□□ 0.65
CSNK1D-214ENST00000580565 MTSS1LQ765P7 747 aa19.11■□□□□ 0.65
CSNK1D-214ENST00000580565 ARHGEF3Q9NR81 526 aa19.11■□□□□ 0.65
CSNK1D-214ENST00000580565 CLTAP09496 248 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 ELF1P32519 619 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 UBA7P41226 1012 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 NCKAP1LP55160 1127 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 ARPP19P56211 112 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 GPC5P78333 572 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 ANGPT1Q15389 498 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 HAUS6Q7Z4H7 955 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 FRMD5Q7Z6J6 570 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 CALML4Q96GE6 196 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 SUSD3Q96L08 255 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 HAPLN2Q9GZV7 340 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 PLEKHA5Q9HAU0 1116 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 ODF2LQ9ULJ1 636 aa19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 MRPS23Q9Y3D9 190 aaKnown RBP19.1■□□□□ 0.65
CSNK1D-214ENST00000580565 ARHGEF37A1IGU5 675 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 WDR27A2RRH5 827 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 PRRG1O14668 218 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 ATF2P15336 505 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 MATR3P43243 847 aaKnown RBP eCLIP19.09■□□□□ 0.651e-6■■□□□ 13.8
CSNK1D-214ENST00000580565 ASCL5Q7RTU5 278 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 GPBP1Q86WP2 473 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 NPAS3Q8IXF0 933 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 KCNN1Q92952 543 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 BICD1Q96G01 975 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 TBC1D32Q96NH3 1257 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 REEP2Q9BRK0 252 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 TUBGCP4Q9UGJ1 667 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 FBXL5Q9UKA1 691 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 SIT1Q9Y3P8 196 aa19.09■□□□□ 0.65
CSNK1D-214ENST00000580565 BMP15O95972 392 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 LRG1P02750 347 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 RHOP08100 348 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 CXCL8P10145 99 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 PTPN2P17706 415 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 MCM4P33991 863 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 DHX8Q14562 1220 aaKnown RBP19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 CTXN3Q4LDR2 81 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 TPGS2Q68CL5 300 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 BRAPQ7Z569 592 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 TCEAL8Q8IYN2 117 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 APPL2Q8NEU8 664 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 LRRC15Q8TF66 581 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 ING5Q8WYH8 240 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 CYP4F11Q9HBI6 524 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 AVENQ9NQS1 362 aaPredicted RBP19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 TBX20Q9UMR3 447 aa19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 MTCL1Q9Y4B5 1905 aaKnown RBP19.08■□□□□ 0.64
CSNK1D-214ENST00000580565 TTC26A0AVF1 554 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 PRR23AA6NEV1 266 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 SEC24AO95486 1093 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 SCP2P22307 547 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 LONP1P36776 959 aaKnown RBP19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 LIG4P49917 911 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 ZNF131P52739 623 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 STARD6P59095 220 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 SPAG1Q07617 926 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 ZBTB6Q15916 424 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 KYAT1Q16773 422 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 SLC5A9Q2M3M2 681 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 MYCT1Q8N699 235 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 DDX12PQ92771 950 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 SHDQ96IW2 340 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 KXD1Q9BQD3 176 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 BLOC1S4Q9NUP1 217 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 GDE1Q9NZC3 331 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 PCDHB8Q9UN66 801 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 MYO15AQ9UKN7 3530 aa19.07■□□□□ 0.64
CSNK1D-214ENST00000580565 HNRNPDLO14979 420 aaKnown RBP19.06■□□□□ 0.64
CSNK1D-214ENST00000580565 FAM13AO94988 1023 aa19.06■□□□□ 0.64
CSNK1D-214ENST00000580565 DCNP07585 359 aaKnown RBP19.06■□□□□ 0.64
CSNK1D-214ENST00000580565 PLCG1P19174 1290 aa19.06■□□□□ 0.64
CSNK1D-214ENST00000580565 MARCKSP29966 332 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms