RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 KLHDC9Q8NEP7 349 aa7.74□□□□□ -1.17
PPP4R1-216ENST00000580283 TET1Q8NFU7 2136 aa7.74□□□□□ -1.17
PPP4R1-216ENST00000580283 HERVK_113Q902F9 699 aa7.74□□□□□ -1.17
PPP4R1-216ENST00000580283 MKL1Q969V6 931 aa7.74□□□□□ -1.17
PPP4R1-216ENST00000580283 DNAJC2Q99543 621 aaKnown RBP7.74□□□□□ -1.17
PPP4R1-216ENST00000580283 KIAA1683Q9H0B3 1180 aa7.74□□□□□ -1.17
PPP4R1-216ENST00000580283 DHX36Q9H2U1 1008 aaKnown RBP7.74□□□□□ -1.17
PPP4R1-216ENST00000580283 RPAP3Q9H6T3 665 aaPredicted RBP7.74□□□□□ -1.17
PPP4R1-216ENST00000580283 XPNPEP3Q9NQH7 507 aa7.74□□□□□ -1.17
PPP4R1-216ENST00000580283 MTCH2Q9Y6C9 303 aa7.74□□□□□ -1.17
PPP4R1-216ENST00000580283 DCHS1Q96JQ0 3298 aa7.74□□□□□ -1.17
PPP4R1-216ENST00000580283 SPTBN4Q9H254 2564 aa7.74□□□□□ -1.17
PPP4R1-216ENST00000580283 FLT1P17948 1338 aa7.74□□□□□ -1.17
PPP4R1-216ENST00000580283 MYO15AQ9UKN7 3530 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 A0A1B0GUL7 405 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 A0A1W2PRG0 241 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 MYADML2A6NDP7 307 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 SMIM22K7EJ46 135 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 KRIT1O00522 736 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 ADCY6O43306 1168 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 BMP7P18075 431 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 IL15P40933 162 aaPredicted RBP7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 MCAMP43121 646 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 GPR85P60893 370 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 SUMO1P63165 101 aaKnown RBP7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 TFCP2Q12800 502 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 SPATA5Q8NB90 893 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 ANKS1AQ92625 1134 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 SPATC1LQ9H0A9 340 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 AATFQ9NY61 560 aaKnown RBP eCLIP7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 SAP30BPQ9UHR5 308 aaKnown RBP7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 PCDHB4Q9Y5E5 795 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 MYH8P13535 1937 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 UMODL1Q5DID0 1318 aa7.73□□□□□ -1.17
PPP4R1-216ENST00000580283 NAV1Q8NEY1 1877 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 TRIP12Q14669 1992 aaPredicted RBP7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 FAM221BA6H8Z2 402 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 CD4P01730 458 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 PGK2P07205 417 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 CYP2C18P33260 490 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 DYNLL1P63167 89 aaKnown RBP7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 NHLH1Q02575 133 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 PPIGQ13427 754 aaKnown RBP eCLIP7.72□□□□□ -1.171e-10■□□□□ 10.2
PPP4R1-216ENST00000580283 CD300LDQ6UXZ3 194 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 MIB1Q86YT6 1006 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 ABRAQ8N0Z2 381 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 SHCBP1Q8NEM2 672 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 FNIP1Q8TF40 1166 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 ALG1Q9BT22 464 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 JAM3Q9BX67 310 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 ZCCHC4Q9H5U6 513 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 SLC28A3Q9HAS3 691 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 PCDH18Q9HCL0 1135 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 NGRNQ9NPE2 291 aaKnown RBP7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 RAI14Q9P0K7 980 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 PPARGC1AQ9UBK2 798 aaKnown RBP7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 MSRAQ9UJ68 235 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 VPS13AQ96RL7 3174 aa7.72□□□□□ -1.17
PPP4R1-216ENST00000580283 COL4A4P53420 1690 aaPredicted RBP7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 CTAGE5O15320 804 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 SNAI1O95863 264 aaPredicted RBP7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 PLA2G1BP04054 148 aaKnown RBP7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 FAM153BP0C7A2 387 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 RARBP10826 455 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 GRK2P25098 689 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 GRK3P35626 688 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 GSTO1P78417 241 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 COG2Q14746 738 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 RAB30Q15771 203 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 LONRF2Q1L5Z9 754 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 EMC4Q5J8M3 183 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 FAM209AQ5JX71 171 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 OTOP2Q7RTS6 562 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 RNF180Q86T96 592 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 FAM126BQ8IXS8 530 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 LINC01356Q8N9X3 169 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 DNAJC7Q99615 494 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 KRTAP9-9Q9BYP9 154 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 KRTAP9-4Q9BYQ2 154 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 OSBPL2Q9H1P3 480 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 IL23AQ9NPF7 189 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 STARD7Q9NQZ5 370 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 ZNF521Q96K83 1311 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 SYNRGQ9UMZ2 1314 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 ROBO3Q96MS0 1386 aa7.71□□□□□ -1.18
PPP4R1-216ENST00000580283 AQP7O14520 342 aa7.7□□□□□ -1.18
PPP4R1-216ENST00000580283 FGBP02675 491 aa7.7□□□□□ -1.18
PPP4R1-216ENST00000580283 C8BP07358 591 aa7.7□□□□□ -1.18
PPP4R1-216ENST00000580283 SHMT1P34896 483 aa7.7□□□□□ -1.18
PPP4R1-216ENST00000580283 USP14P54578 494 aa7.7□□□□□ -1.18
PPP4R1-216ENST00000580283 TMEM132BQ14DG7 1078 aa7.7□□□□□ -1.18
PPP4R1-216ENST00000580283 SEPT2Q15019 361 aa7.7□□□□□ -1.18
PPP4R1-216ENST00000580283 AAK1Q2M2I8 961 aa7.7□□□□□ -1.18
PPP4R1-216ENST00000580283 ZC3H12BQ5HYM0 836 aaKnown RBP7.7□□□□□ -1.18
PPP4R1-216ENST00000580283 FOXB2Q5VYV0 432 aa7.7□□□□□ -1.18
PPP4R1-216ENST00000580283 MAMDC2Q7Z304 686 aaPredicted RBP7.7□□□□□ -1.18
PPP4R1-216ENST00000580283 TMEM199Q8N511 208 aa7.7□□□□□ -1.18
PPP4R1-216ENST00000580283 PHOSPHO1Q8TCT1 267 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms