RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 MTHFRP42898 656 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 AFMP43652 599 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 BRCC3P46736 316 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 ACOT2P49753 483 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 CASP5P51878 434 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 ENOX2Q16206 610 aaKnown RBP11.85□□□□□ -0.51
NDEL1-208ENST00000580237 FAM26FQ5R3K3 315 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 LIN9Q5TKA1 542 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 ARMCX5Q6P1M9 558 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 GPR65Q8IYL9 337 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 C12orf76Q8N812 135 aaPredicted RBP11.85□□□□□ -0.51
NDEL1-208ENST00000580237 C3orf58Q8NDZ4 430 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 BEST2Q8NFU1 509 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 PIK3R5Q8WYR1 880 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 CHAMP1Q96JM3 812 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 PHF7Q9BWX1 381 aaPredicted RBP11.85□□□□□ -0.51
NDEL1-208ENST00000580237 BLZF1Q9H2G9 400 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 ADAM7Q9H2U9 754 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 TMEM206Q9H813 350 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 RXFP1Q9HBX9 757 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 ZDHHC9Q9Y397 364 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 SCN1AP35498 2009 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 TTC26A0AVF1 554 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 LACTBL1A8MY62 500 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 LILRB3O75022 631 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 PRPF6O94906 941 aaKnown RBP11.84□□□□□ -0.51
NDEL1-208ENST00000580237 EFEMP2O95967 443 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 SPATA31D3P0C874 917 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 PFKFB1P16118 471 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 NUCB2P80303 420 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 TMEM132DQ14C87 1099 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 ATAT1Q5SQI0 421 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 JADE1Q6IE81 842 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 SPATA31D4Q6ZUB0 917 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 ANKS3Q6ZW76 656 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 CD302Q8IX05 232 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 SUSD6Q92537 303 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 S1PR5Q9H228 398 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 IKZF4Q9H2S9 585 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 PIDD1Q9HB75 910 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 CD320Q9NPF0 282 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 FNIP2Q9P278 1114 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 CDH22Q9UJ99 828 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 CPSF3Q9UKF6 684 aaKnown RBP11.84□□□□□ -0.51
NDEL1-208ENST00000580237 NR2E1Q9Y466 385 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 BDP1A6H8Y1 2624 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 VCANP13611 3396 aa11.84□□□□□ -0.51
NDEL1-208ENST00000580237 XIRP2A4UGR9 3374 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 DOCK6Q96HP0 2047 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 A0A1B0GVL5 298 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 GOLGA6L4A6NEF3 574 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 MEFVO15553 781 aaPredicted RBP11.83□□□□□ -0.52
NDEL1-208ENST00000580237 TGM5O43548 720 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 FAM189A1O60320 539 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 NFICP08651 508 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 FGFR3P22607 806 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 SYKP43405 635 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 KCNA1Q09470 495 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 ZNF280DQ6N043 979 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 KANK3Q6NY19 840 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 CCDC149Q6ZUS6 474 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 UNC13DQ70J99 1090 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 FSIP1Q8NA03 581 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 TDRD5Q8NAT2 981 aaKnown RBP11.83□□□□□ -0.52
NDEL1-208ENST00000580237 HPS3Q969F9 1004 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 SAAL1Q96ER3 474 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 TSPAN18Q96SJ8 248 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 C7orf25Q9BPX7 421 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 FAM213AQ9BRX8 229 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 FGFBP2Q9BYJ0 223 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 PLEKHA4Q9H4M7 779 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 POMKQ9H5K3 350 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 EXOC1Q9NV70 894 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 USP25Q9UHP3 1055 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 SERTAD1Q9UHV2 236 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 CDY1Q9Y6F8 540 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 MYO10Q9HD67 2058 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 UBE4BO95155 1302 aa11.83□□□□□ -0.52
NDEL1-208ENST00000580237 DOCK8Q8NF50 2099 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 H7C4K7 107 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 SYN3O14994 580 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 EIF3DO15371 548 aaKnown RBP eCLIP11.82□□□□□ -0.52
NDEL1-208ENST00000580237 DCXO43602 365 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 IL18RAPO95256 599 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 LDHAP00338 332 aaKnown RBP11.82□□□□□ -0.52
NDEL1-208ENST00000580237 SLFN14P0C7P3 912 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 ALADP13716 330 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 CYP3A5P20815 502 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 GARTP22102 1010 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 CMA1P23946 247 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 CASP1P29466 404 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 OR1D2P34982 312 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 GUCY2FP51841 1108 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 ARPP19P56211 112 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
NDEL1-208ENST00000580237 DSTYKQ6XUX3 929 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 C15orf39Q6ZRI6 1047 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 HS2ST1Q7LGA3 356 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 GRAMD1CQ8IYS0 662 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 KREMEN2Q8NCW0 462 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms