RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 SNX29Q8TEQ0 813 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 ING5Q8WYH8 240 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 KIFC3Q9BVG8 833 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 TIPINQ9BVW5 301 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 CXCL16Q9H2A7 254 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 POLD4Q9HCU8 107 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 KMT5AQ9NQR1 393 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 PCDHGA2Q9Y5H1 932 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.61■□□□□ 0.73
MKS1-209ENST00000580127 VWA8A3KMH1 1905 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 MAN2B1O00754 1011 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 MICAL2O94851 1124 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 ABLIM3O94929 683 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 KCNE1P15382 129 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 BRCC3P46736 316 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 NPTX2P47972 431 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 SMTNP53814 917 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 ARPP19P56211 112 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 OSTNP61366 133 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 PPP2R5DQ14738 602 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 XKR4Q5GH76 650 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 VARS2Q5ST30 1063 aaKnown RBP19.6■□□□□ 0.73
MKS1-209ENST00000580127 ALKAL1Q6UXT8 129 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 DGLUCYQ7Z3D6 616 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 CCDC83Q8IWF9 413 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 TCEAL8Q8IYN2 117 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 ELSPBP1Q96BH3 223 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 ZNF512Q96ME7 567 aaPredicted RBP19.6■□□□□ 0.73
MKS1-209ENST00000580127 CYP4F11Q9HBI6 524 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 ZFP14Q9HCL3 533 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 LTB4R2Q9NPC1 389 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 NCDNQ9UBB6 729 aa19.6■□□□□ 0.73
MKS1-209ENST00000580127 I3L4J1 428 aa19.59■□□□□ 0.73
MKS1-209ENST00000580127 PODXLO00592 558 aa19.59■□□□□ 0.73
MKS1-209ENST00000580127 GLULP15104 373 aa19.59■□□□□ 0.73
MKS1-209ENST00000580127 RPS9P46781 194 aaKnown RBP19.59■□□□□ 0.73
MKS1-209ENST00000580127 ROR1Q01973 937 aa19.59■□□□□ 0.73
MKS1-209ENST00000580127 PTGDRQ13258 359 aa19.59■□□□□ 0.73
MKS1-209ENST00000580127 TPRG1Q6ZUI0 275 aa19.59■□□□□ 0.73
MKS1-209ENST00000580127 LEMD2Q8NC56 503 aa19.59■□□□□ 0.73
MKS1-209ENST00000580127 DNASE1L2Q92874 299 aa19.59■□□□□ 0.73
MKS1-209ENST00000580127 CORO1BQ9BR76 489 aa19.59■□□□□ 0.73
MKS1-209ENST00000580127 FAM126AQ9BYI3 521 aaPredicted RBP19.59■□□□□ 0.73
MKS1-209ENST00000580127 ZSCAN32Q9NX65 697 aa19.59■□□□□ 0.73
MKS1-209ENST00000580127 PPP4R2Q9NY27 417 aa19.59■□□□□ 0.73
MKS1-209ENST00000580127 FANCMQ8IYD8 2048 aa19.59■□□□□ 0.73
MKS1-209ENST00000580127 LRRN2O75325 713 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 ADCY1Q08828 1119 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 CTXN3Q4LDR2 81 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 MPZL3Q6UWV2 235 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 DTHD1Q6ZMT9 781 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 PDZD4Q76G19 769 aaPredicted RBP19.58■□□□□ 0.72
MKS1-209ENST00000580127 KCTD17Q8N5Z5 321 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 IRF7Q92985 503 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 CLDN23Q96B33 292 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 NTPCRQ9BSD7 190 aaKnown RBP19.58■□□□□ 0.72
MKS1-209ENST00000580127 TRMT61BQ9BVS5 477 aaKnown RBP19.58■□□□□ 0.72
MKS1-209ENST00000580127 TARS2Q9BW92 718 aaKnown RBP19.58■□□□□ 0.72
MKS1-209ENST00000580127 OXCT2Q9BYC2 517 aaPredicted RBP19.58■□□□□ 0.72
MKS1-209ENST00000580127 CDT1Q9H211 546 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 BRD9Q9H8M2 597 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 GOLGA2P5Q9HBQ8 144 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 PTPRHQ9HD43 1115 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 SH2B1Q9NRF2 756 aaPredicted RBP19.58■□□□□ 0.72
MKS1-209ENST00000580127 MTF2Q9Y483 593 aaPredicted RBP19.58■□□□□ 0.72
MKS1-209ENST00000580127 KIF3AQ9Y496 699 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 MYO15AQ9UKN7 3530 aa19.58■□□□□ 0.72
MKS1-209ENST00000580127 HIP1RO75146 1068 aa19.57■□□□□ 0.72
MKS1-209ENST00000580127 EDN1P05305 212 aa19.57■□□□□ 0.72
MKS1-209ENST00000580127 CD72P21854 359 aa19.57■□□□□ 0.72
MKS1-209ENST00000580127 NRLP54845 237 aa19.57■□□□□ 0.72
MKS1-209ENST00000580127 ECM1Q16610 540 aa19.57■□□□□ 0.72
MKS1-209ENST00000580127 ZNF280DQ6N043 979 aa19.57■□□□□ 0.72
MKS1-209ENST00000580127 CD300LGQ6UXG3 332 aa19.57■□□□□ 0.72
MKS1-209ENST00000580127 C4orf32Q8N8J7 132 aa19.57■□□□□ 0.72
MKS1-209ENST00000580127 IGSF22Q8N9C0 903 aa19.57■□□□□ 0.72
MKS1-209ENST00000580127 SUMF1Q8NBK3 374 aa19.57■□□□□ 0.72
MKS1-209ENST00000580127 RMDN1Q96DB5 314 aa19.57■□□□□ 0.72
MKS1-209ENST00000580127 GPR88Q9GZN0 384 aa19.57■□□□□ 0.72
MKS1-209ENST00000580127 ARHGAP28Q9P2N2 729 aa19.57■□□□□ 0.72
MKS1-209ENST00000580127 CITO14578 2027 aa19.56■□□□□ 0.72
MKS1-209ENST00000580127 NOTCH4Q99466 2003 aa19.56■□□□□ 0.72
MKS1-209ENST00000580127 MCM4P33991 863 aa19.56■□□□□ 0.72
MKS1-209ENST00000580127 PRPHP41219 470 aa19.56■□□□□ 0.72
MKS1-209ENST00000580127 TANGO2Q6ICL3 276 aa19.56■□□□□ 0.72
MKS1-209ENST00000580127 MAML2Q8IZL2 1156 aaPredicted RBP19.56■□□□□ 0.72
MKS1-209ENST00000580127 C3orf58Q8NDZ4 430 aa19.56■□□□□ 0.72
MKS1-209ENST00000580127 E2F7Q96AV8 911 aa19.56■□□□□ 0.72
MKS1-209ENST00000580127 SUSD3Q96L08 255 aa19.56■□□□□ 0.72
MKS1-209ENST00000580127 CNTN3Q9P232 1028 aa19.56■□□□□ 0.72
MKS1-209ENST00000580127 FBXL5Q9UKA1 691 aa19.56■□□□□ 0.72
MKS1-209ENST00000580127 INSL5Q9Y5Q6 135 aa19.56■□□□□ 0.72
MKS1-209ENST00000580127 WDR27A2RRH5 827 aa19.55■□□□□ 0.72
MKS1-209ENST00000580127 E9PMD0 336 aa19.55■□□□□ 0.72
MKS1-209ENST00000580127 H0YCG3 227 aa19.55■□□□□ 0.72
MKS1-209ENST00000580127 CLDN3O15551 220 aa19.55■□□□□ 0.72
MKS1-209ENST00000580127 TOM1L1O75674 476 aa19.55■□□□□ 0.72
MKS1-209ENST00000580127 IGFBP6P24592 240 aaPredicted RBP19.55■□□□□ 0.72
MKS1-209ENST00000580127 U2AF2P26368 475 aaKnown RBP eCLIP19.55■□□□□ 0.72
MKS1-209ENST00000580127 MATR3P43243 847 aaKnown RBP eCLIP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms