RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 MRPL58Q14197 206 aaKnown RBP12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 AASDHQ4L235 1098 aaPredicted RBP12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 HEATR6Q6AI08 1181 aaKnown RBP12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 TCEAL6Q6IPX3 200 aa12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 PSAPL1Q6NUJ1 521 aa12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 ZNF461Q8TAF7 563 aa12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 CCDC12Q8WUD4 166 aaPredicted RBP12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 SMARCD2Q92925 531 aa12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 TCEAL3Q969E4 200 aa12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 ZC3H10Q96K80 434 aaKnown RBP12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 MKNK1Q9BUB5 465 aa12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 FZD8Q9H461 694 aa12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 INO80B-WBP1J3KQ70 363 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 EXTL3O43909 919 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 SLITRK3O94933 977 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 VNN2O95498 520 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 KCNA4P22459 653 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 PPP2R5DQ14738 602 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 EPHA7Q15375 998 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 EXOC8Q8IYI6 725 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 TCEAL8Q8IYN2 117 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 FBXL16Q8N461 479 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 BICD2Q8TD16 824 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 TCP11Q8WWU5 503 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 GAB3Q8WWW8 586 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 PPP1R10Q96QC0 940 aaKnown RBP12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 LXNQ9BS40 222 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 RNF26Q9BY78 433 aaPredicted RBP12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 SH3GLB2Q9NR46 395 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 SNTG2Q9NY99 539 aa12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 KIF26AQ9ULI4 1882 aaPredicted RBP12.38□□□□□ -0.43
SUPT4H1-203ENST00000579289 I3L4J1 428 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 ATF2P15336 505 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 IFNAR1P17181 557 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 GJA1P17302 382 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 BRCC3P46736 316 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 RBM25P49756 843 aaKnown RBP12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 CLCNKBP51801 687 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 SOX4Q06945 474 aaPredicted RBP12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 MXD4Q14582 209 aaPredicted RBP12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 UPP1Q16831 310 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 FAM187BQ17R55 369 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 ERICH6BQ5W0A0 696 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 PDXDC1Q6P996 788 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 DEPDC1BQ8WUY9 529 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 KCNB2Q92953 911 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 DYDC2Q96IM9 177 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 MTRQ99707 1265 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 CORO1BQ9BR76 489 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 ADAM33Q9BZ11 813 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 PDZD7Q9H5P4 517 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 POLR3BQ9NW08 1133 aaPredicted RBP12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 PARP2Q9UGN5 583 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 PCDHA4Q9UN74 947 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 USP20Q9Y2K6 914 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 BPTFQ12830 3046 aa12.37□□□□□ -0.43
SUPT4H1-203ENST00000579289 TRIP11Q15643 1979 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 CCDC163A0A0D9SF12 145 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 HEPACAM2A8MVW5 462 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 SPECC1L-ADORA2AF8WAN1 911 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 MEFVO15553 781 aaPredicted RBP12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 RECQL4O94761 1208 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 LYPLA2O95372 231 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 THP07101 528 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 PXNP49023 591 aaPredicted RBP12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 EVCP57679 992 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 ELAVL2Q12926 359 aaKnown RBP12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 CDCA2Q69YH5 1023 aaPredicted RBP12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 TMC8Q8IU68 726 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 DAGLBQ8NCG7 672 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 SHKBP1Q8TBC3 707 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 ZSCAN18Q8TBC5 510 aaPredicted RBP12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 HSD17B14Q9BPX1 270 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 DDX25Q9UHL0 483 aaKnown RBP12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 PCDHGA5Q9Y5G8 931 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 INSL5Q9Y5Q6 135 aa12.36□□□□□ -0.43
SUPT4H1-203ENST00000579289 FLNBO75369 2602 aaKnown RBP12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 TMEM8BA6NDV4 472 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 SLC38A8A6NNN8 435 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 CDX4O14627 284 aaPredicted RBP12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 ZNF263O14978 683 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 CHADO15335 359 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 CTHP32929 405 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 HSPA4P34932 840 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 MPLP40238 635 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 CACNB1Q02641 598 aaPredicted RBP12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 CTTNQ14247 550 aaKnown RBP12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 PLK5Q496M5 336 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 SOWAHCQ53LP3 525 aaPredicted RBP12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 XKR9Q5GH70 373 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 XKR4Q5GH76 650 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 EEF1DP3Q658K8 133 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 PPP4R3AQ6IN85 833 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 ALKAL1Q6UXT8 129 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 MSANTD3Q96H12 275 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 FAM20AQ96MK3 541 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 SCNM1Q9BWG6 230 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 TRIM6Q9C030 488 aaPredicted RBP12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 CCDC113Q9H0I3 377 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms