RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 SYKP43405 635 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 BRCC3P46736 316 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 KCNA1Q09470 495 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 KCNC3Q14003 757 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 TMEM132DQ14C87 1099 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 ENOX2Q16206 610 aaKnown RBP16.58■□□□□ 0.24
SMG6-220ENST00000576218 SYCE2Q6PIF2 218 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 UNC13DQ70J99 1090 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 GRAMD1CQ8IYS0 662 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 C12orf76Q8N812 135 aaPredicted RBP16.58■□□□□ 0.24
SMG6-220ENST00000576218 SLC22A17Q8WUG5 538 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 HPS3Q969F9 1004 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 CCDC47Q96A33 483 aaKnown RBP16.58■□□□□ 0.24
SMG6-220ENST00000576218 CCDC34Q96HJ3 373 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 RPGRIP1Q96KN7 1286 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 NECTIN4Q96NY8 510 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 FAM213AQ9BRX8 229 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 GDPD2Q9HCC8 539 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 MAN1C1Q9NR34 630 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 EXOC1Q9NV70 894 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 USP25Q9UHP3 1055 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 CPSF3Q9UKF6 684 aaKnown RBP16.58■□□□□ 0.24
SMG6-220ENST00000576218 LILRB3O75022 631 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 LDHAP00338 332 aaKnown RBP16.57■□□□□ 0.24
SMG6-220ENST00000576218 SLFN14P0C7P3 912 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 SP100P23497 879 aaPredicted RBP16.57■□□□□ 0.24
SMG6-220ENST00000576218 TKTP29401 623 aaKnown RBP16.57■□□□□ 0.24
SMG6-220ENST00000576218 CASP1P29466 404 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 MTHFRP42898 656 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 ZP2Q05996 745 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 ATAT1Q5SQI0 421 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 LIN9Q5TKA1 542 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 JADE1Q6IE81 842 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 TMC5Q6UXY8 1006 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 GPR65Q8IYL9 337 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 PIK3R5Q8WYR1 880 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 SAAL1Q96ER3 474 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 TSPAN18Q96SJ8 248 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 PHF7Q9BWX1 381 aaPredicted RBP16.57■□□□□ 0.24
SMG6-220ENST00000576218 FGFBP2Q9BYJ0 223 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 IKZF4Q9H2S9 585 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 ADAM7Q9H2U9 754 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 RXFP1Q9HBX9 757 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 FNIP2Q9P278 1114 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 VCANP13611 3396 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 TRIP11Q15643 1979 aa16.57■□□□□ 0.24
SMG6-220ENST00000576218 IL18RAPO95256 599 aa16.56■□□□□ 0.24
SMG6-220ENST00000576218 EFEMP2O95967 443 aa16.56■□□□□ 0.24
SMG6-220ENST00000576218 WEE2P0C1S8 567 aa16.56■□□□□ 0.24
SMG6-220ENST00000576218 SPATA31D3P0C874 917 aa16.56■□□□□ 0.24
SMG6-220ENST00000576218 CYP3A5P20815 502 aa16.56■□□□□ 0.24
SMG6-220ENST00000576218 ANP32AP39687 249 aaKnown RBP16.56■□□□□ 0.24
SMG6-220ENST00000576218 CUL4BQ13620 913 aa16.56■□□□□ 0.24
SMG6-220ENST00000576218 DSTYKQ6XUX3 929 aa16.56■□□□□ 0.24
SMG6-220ENST00000576218 SPATA31D4Q6ZUB0 917 aa16.56■□□□□ 0.24
SMG6-220ENST00000576218 ANKS3Q6ZW76 656 aa16.56■□□□□ 0.24
SMG6-220ENST00000576218 C3orf58Q8NDZ4 430 aa16.56■□□□□ 0.24
SMG6-220ENST00000576218 PCIF1Q9H4Z3 704 aa16.56■□□□□ 0.24
SMG6-220ENST00000576218 PIDD1Q9HB75 910 aa16.56■□□□□ 0.24
SMG6-220ENST00000576218 STYXL1Q9Y6J8 313 aa16.56■□□□□ 0.24
SMG6-220ENST00000576218 UBE4BO95155 1302 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 PVALEFA0A1B0GWK0 134 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 EIF3DO15371 548 aaKnown RBP eCLIP16.55■□□□□ 0.24
SMG6-220ENST00000576218 MEFVO15553 781 aaPredicted RBP16.55■□□□□ 0.24
SMG6-220ENST00000576218 FAM189A1O60320 539 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 NFICP08651 508 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 GARTP22102 1010 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 NDUFA8P51970 172 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 CNNM4Q6P4Q7 775 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 HS2ST1Q7LGA3 356 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 NELFCDQ8IXH7 590 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 APPL2Q8NEU8 664 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 LNX1Q8TBB1 728 aaPredicted RBP16.55■□□□□ 0.24
SMG6-220ENST00000576218 PAGE5Q96GU1 130 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 STRA6Q9BX79 667 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 S1PR5Q9H228 398 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 ASB7Q9H672 318 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 SLC39A2Q9NP94 309 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 RBAKQ9NYW8 714 aaPredicted RBP16.55■□□□□ 0.24
SMG6-220ENST00000576218 DERAQ9Y315 318 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 R3HCC1Q9Y3T6 440 aaKnown RBP16.55■□□□□ 0.24
SMG6-220ENST00000576218 NR2E1Q9Y466 385 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 SPTBN5Q9NRC6 3674 aaKnown RBP16.55■□□□□ 0.24
SMG6-220ENST00000576218 NCOR1O75376 2440 aa16.55■□□□□ 0.24
SMG6-220ENST00000576218 A0A1W2PQ27 194 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 A0A1W2PQ64 194 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 A0A1W2PQD8 194 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 GOLGA8IPA6NC78 632 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 GOLGA8JA6NMD2 632 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 H7C4K7 107 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 SYN3O14994 580 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 TGM5O43548 720 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 ACTN4O43707 911 aaKnown RBP16.54■□□□□ 0.24
SMG6-220ENST00000576218 FGFR3P22607 806 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 ADSSP30520 456 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 OR1D2P34982 312 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 GUCY2FP51841 1108 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 ARPP19P56211 112 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 KANK3Q6NY19 840 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 USP37Q86T82 979 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms