RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 LIG4P49917 911 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 BACE1P56817 501 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 ACTR2P61160 394 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 SNX1Q13596 522 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 LLGL1Q15334 1064 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 SPRED3Q2MJR0 410 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 WDR44Q5JSH3 913 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 SNRNP48Q6IEG0 339 aaKnown RBP9.54□□□□□ -0.88
NCBP3-204ENST00000574911 PIGWQ7Z7B1 504 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 SNF8Q96H20 258 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 DDX23Q9BUQ8 820 aaKnown RBP9.54□□□□□ -0.88
NCBP3-204ENST00000574911 KDM4CQ9H3R0 1056 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 INTS9Q9NV88 658 aaKnown RBP9.54□□□□□ -0.88
NCBP3-204ENST00000574911 SLC9A2Q9UBY0 812 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 ADAMTS5Q9UNA0 930 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 NEU2Q9Y3R4 380 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 GOLGA6L7A0A1B0GV03 622 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 SPATA31C2B4DYI2 1134 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 RASSF9O75901 435 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 GHRP10912 638 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 NSFP46459 744 aaKnown RBP9.54□□□□□ -0.88
NCBP3-204ENST00000574911 SLCO1A2P46721 670 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 NLRP11P59045 1033 aaKnown RBP9.54□□□□□ -0.88
NCBP3-204ENST00000574911 CAV1Q03135 178 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 EN1Q05925 392 aaPredicted RBP9.54□□□□□ -0.88
NCBP3-204ENST00000574911 KLF1Q13351 362 aaPredicted RBP9.54□□□□□ -0.88
NCBP3-204ENST00000574911 CNGA2Q16280 664 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 XKR3Q5GH77 459 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 LMBRD2Q68DH5 695 aaPredicted RBP9.54□□□□□ -0.88
NCBP3-204ENST00000574911 LLGL2Q6P1M3 1020 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 CRELD2Q6UXH1 353 aaPredicted RBP9.54□□□□□ -0.88
NCBP3-204ENST00000574911 PHLDB2Q86SQ0 1253 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 EXOC3L1Q86VI1 746 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 CCDC25Q86WR0 208 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 GRK7Q8WTQ7 553 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 ATG4AQ8WYN0 398 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 CCT6BQ92526 530 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 CDHR1Q96JP9 859 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 JPH2Q9BR39 696 aaPredicted RBP9.54□□□□□ -0.88
NCBP3-204ENST00000574911 HAPLN2Q9GZV7 340 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 ASIC3Q9UHC3 531 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 KCNG1Q9UIX4 513 aa9.54□□□□□ -0.88
NCBP3-204ENST00000574911 PTPRJQ12913 1337 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 PSTPIP1O43586 416 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 PIGRP01833 764 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 SUPT20HL2P0C7V6 817 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 PIK3CAP42336 1068 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 ITIH4Q14624 930 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 SUPT20HL1Q3ZLR7 823 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 SPOPLQ6IQ16 392 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 MIS18BP1Q6P0N0 1132 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 TRIM72Q6ZMU5 477 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 TAOK1Q7L7X3 1001 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 LRRC34Q8IZ02 419 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 CCDC197Q8NCU1 140 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 ATL2Q8NHH9 583 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 C12orf42Q96LP6 360 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 SERPINB12Q96P63 405 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 FNBP1Q96RU3 617 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 PRMT1Q99873 361 aaKnown RBP9.53□□□□□ -0.88
NCBP3-204ENST00000574911 APOBEC3GQ9HC16 384 aaKnown RBP9.53□□□□□ -0.88
NCBP3-204ENST00000574911 ZNF112Q9UJU3 913 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 ZNF214Q9UL59 606 aaPredicted RBP9.53□□□□□ -0.88
NCBP3-204ENST00000574911 R3HDM2Q9Y2K5 976 aaKnown RBP9.53□□□□□ -0.88
NCBP3-204ENST00000574911 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.53□□□□□ -0.88
NCBP3-204ENST00000574911 RLFQ13129 1914 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 WDR81Q562E7 1941 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 ZNF541Q9H0D2 1346 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 SORBS3O60504 671 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 STAM2O75886 525 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 CFHP08603 1231 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 TNNI1P19237 187 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 ATP4AP20648 1035 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 ITGA8P53708 1063 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 CUL2Q13617 745 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 TMEM132BQ14DG7 1078 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 EMC2Q15006 297 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 MTERF2Q49AM1 385 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 NBPF12Q5TAG4 269 aaPredicted RBP9.53□□□□□ -0.88
NCBP3-204ENST00000574911 LIN9Q5TKA1 542 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 TAX1BP1Q86VP1 789 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 SCYL3Q8IZE3 742 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 ABRAQ8N0Z2 381 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 ZNF280CQ8ND82 737 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 CEP89Q96ST8 783 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 AS3MTQ9HBK9 375 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 HOMER3Q9NSC5 361 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 CYP39A1Q9NYL5 469 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 AGO2Q9UKV8 859 aaKnown RBP9.53□□□□□ -0.88
NCBP3-204ENST00000574911 CNTN6Q9UQ52 1028 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 DOCK1Q14185 1865 aa9.53□□□□□ -0.88
NCBP3-204ENST00000574911 CCT8L1PA6NM43 557 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 ATP2A1O14983 1001 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 TCEA3O75764 348 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 RXRBP28702 533 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 SCTRP47872 440 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 ACOT2P49753 483 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 TAS2R40P59535 323 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 NOMO3P69849 1222 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 SP4Q02446 784 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms