RNA–Protein interactions for RNA: ENST00000573725.1

PRPF8-209, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-209ENST00000573725 KHSRPQ92945 711 aaKnown RBP eCLIP6.92□□□□□ -1.3
PRPF8-209ENST00000573725 BRF1Q92994 677 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 HLA-CQ95604 372 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 NACC2Q96BF6 587 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 ATP6V1G3Q96LB4 118 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 SMC6Q96SB8 1091 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 RAD9AQ99638 391 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 UBAC1Q9BSL1 405 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 C16orf70Q9BSU1 422 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 ZBED2Q9BTP6 218 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 KATNAL1Q9BW62 490 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 AMNQ9BXJ7 453 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 KRT23Q9C075 422 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 EPHX3Q9H6B9 360 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 MTUS1Q9ULD2 1270 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 EFR3BQ9Y2G0 817 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 PCDHA1Q9Y5I3 950 aa6.92□□□□□ -1.3
PRPF8-209ENST00000573725 COL4A6Q14031 1691 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 A0A0J9YVX5 310 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 GOLGA6L10A0A0M3HER8 536 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 TMEM110-MUSTN1A8MSY1 372 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.91□□□□□ -1.3
PRPF8-209ENST00000573725 HIP1O00291 1037 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 ZBTB5O15062 677 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 BIRC5O15392 142 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 CYTH3O43739 400 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 LGR5O75473 907 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 ALDH2P05091 517 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 PDHA1P08559 390 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 TRIM21P19474 475 aaKnown RBP6.91□□□□□ -1.3
PRPF8-209ENST00000573725 UBA1P22314 1058 aaKnown RBP6.91□□□□□ -1.3
PRPF8-209ENST00000573725 GSTT1P30711 240 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 HOXC8P31273 242 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 PCK1P35558 622 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 CLCN2P51788 898 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 ERVK-21P61565 698 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 NCALDP61601 193 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 PAK2Q13177 524 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 IKBKEQ14164 716 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 PTPN21Q16825 1174 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 P3H1Q32P28 736 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 CNPY1Q3B7I2 92 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 MAP7D1Q3KQU3 841 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 CFAP58Q5T655 872 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 IFIT1BQ5T764 474 aaKnown RBP6.91□□□□□ -1.3
PRPF8-209ENST00000573725 PAPD7Q5XG87 772 aaKnown RBP6.91□□□□□ -1.3
PRPF8-209ENST00000573725 KCTD16Q68DU8 428 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 TRIM68Q6AZZ1 485 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 IQCEQ6IPM2 695 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.91□□□□□ -1.31e-11■■■■■ 45.2
PRPF8-209ENST00000573725 RUFY4Q6ZNE9 571 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 ZNF572Q7Z3I7 529 aaPredicted RBP6.91□□□□□ -1.3
PRPF8-209ENST00000573725 CCDC197Q8NCU1 140 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 SPOCK2Q92563 424 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 TAF4BQ92750 862 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 SPATA33Q96N06 139 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 TGS1Q96RS0 853 aaKnown RBP6.91□□□□□ -1.3
PRPF8-209ENST00000573725 DUSP9Q99956 384 aaKnown RBP6.91□□□□□ -1.3
PRPF8-209ENST00000573725 SDF4Q9BRK5 362 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 LRFN3Q9BTN0 628 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 C1QTNF1Q9BXJ1 281 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 IRF2BPLQ9H1B7 796 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 RIOX1Q9H6W3 641 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 CNNM2Q9H8M5 875 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 TMBIM4Q9HC24 238 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 CD320Q9NPF0 282 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 PPANQ9NQ55 473 aaKnown RBP6.91□□□□□ -1.3
PRPF8-209ENST00000573725 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.91□□□□□ -1.3
PRPF8-209ENST00000573725 RMND1Q9NWS8 449 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 QPCTLQ9NXS2 382 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 ADAM22Q9P0K1 906 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 DLGAP2Q9P1A6 1054 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 SUCLA2Q9P2R7 463 aaPredicted RBP6.91□□□□□ -1.3
PRPF8-209ENST00000573725 HSFX1Q9UBD0 423 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 HESX1Q9UBX0 185 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 SLC12A6Q9UHW9 1150 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 LNPEPQ9UIQ6 1025 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 TUBE1Q9UJT0 475 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 TAF6LQ9Y6J9 622 aa6.91□□□□□ -1.3
PRPF8-209ENST00000573725 MYH10P35580 1976 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.9□□□□□ -1.3
PRPF8-209ENST00000573725 HTR3EA5X5Y0 456 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 ZNF233A6NK53 670 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 RSPH10B2B2RC85 870 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 H3BRB1 525 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 HNRNPRO43390 633 aaKnown RBP6.9□□□□□ -1.3
PRPF8-209ENST00000573725 PRPF3O43395 683 aaKnown RBP6.9□□□□□ -1.3
PRPF8-209ENST00000573725 NDUFB5O43674 189 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 EFCAB14O75071 495 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 LGALS2P05162 132 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 ITGA2BP08514 1039 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 RSPH10BP0C881 870 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 SMIM10L2AP0DMW4 78 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 SMIM10L2BP0DMW5 78 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 TGFB3P10600 412 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 CCND2P30279 289 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 TCF7P36402 384 aaPredicted RBP6.9□□□□□ -1.3
PRPF8-209ENST00000573725 PLA2G5P39877 138 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 THPOP40225 353 aa6.9□□□□□ -1.3
PRPF8-209ENST00000573725 PEX5P50542 639 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms