RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PRPSAP2O60256 369 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 RECQL4O94761 1208 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 FTCDO95954 541 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 CRYBB1P53674 252 aaPredicted RBP10.78□□□□□ -0.68
SMG6-213ENST00000573166 KLHDC7AQ5VTJ3 777 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 TRIM65Q6PJ69 517 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 OTUD6BQ8N6M0 293 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 CALN1Q9BXU9 219 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 NIFKQ9BYG3 293 aaKnown RBP10.78□□□□□ -0.68
SMG6-213ENST00000573166 HIPK3Q9H422 1215 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 ASB7Q9H672 318 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 RSAD1Q9HA92 442 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 RNF19AQ9NV58 838 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 MOCS3O95396 460 aa10.77□□□□□ -0.68
SMG6-213ENST00000573166 PSMA2P25787 234 aa10.77□□□□□ -0.68
SMG6-213ENST00000573166 GRIK1P39086 918 aa10.77□□□□□ -0.68
SMG6-213ENST00000573166 RTP1P59025 263 aa10.77□□□□□ -0.68
SMG6-213ENST00000573166 MYL6P60660 151 aa10.77□□□□□ -0.68
SMG6-213ENST00000573166 GPC5P78333 572 aa10.77□□□□□ -0.68
SMG6-213ENST00000573166 TRIM72Q6ZMU5 477 aa10.77□□□□□ -0.68
SMG6-213ENST00000573166 PDZD4Q76G19 769 aaPredicted RBP10.77□□□□□ -0.68
SMG6-213ENST00000573166 WDR49Q8IV35 697 aa10.77□□□□□ -0.68
SMG6-213ENST00000573166 KRT222Q8N1A0 295 aa10.77□□□□□ -0.68
SMG6-213ENST00000573166 AGPAT1Q99943 283 aa10.77□□□□□ -0.68
SMG6-213ENST00000573166 DUSP9Q99956 384 aaKnown RBP10.77□□□□□ -0.68
SMG6-213ENST00000573166 PCDHB2Q9Y5E7 798 aa10.77□□□□□ -0.68
SMG6-213ENST00000573166 COL1A2P08123 1366 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 MOXD2PA6NHM9 499 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 B4GALT5O43286 388 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 ACLYP53396 1101 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 ZNF200P98182 395 aaPredicted RBP10.77□□□□□ -0.69
SMG6-213ENST00000573166 BTG3Q14201 252 aaPredicted RBP10.77□□□□□ -0.69
SMG6-213ENST00000573166 MAATS1Q7Z4T9 603 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 TRIM59Q8IWR1 403 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 PPP1R13BQ96KQ4 1090 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 HTATIP2Q9BUP3 242 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 DHX33Q9H6R0 707 aaKnown RBP10.77□□□□□ -0.69
SMG6-213ENST00000573166 UBN1Q9NPG3 1134 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 BCCIPQ9P287 314 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMG6-213ENST00000573166 MTRF1LQ9UGC7 380 aaKnown RBP10.77□□□□□ -0.69
SMG6-213ENST00000573166 ADAMTS5Q9UNA0 930 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 DHX15O43143 795 aaKnown RBP10.77□□□□□ -0.69
SMG6-213ENST00000573166 ALDH2P05091 517 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 TUBB4BP68371 445 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 CLUL1Q15846 466 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 FAM102AQ5T9C2 384 aaPredicted RBP10.77□□□□□ -0.69
SMG6-213ENST00000573166 BRSK2Q8IWQ3 736 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 KANSL3Q9P2N6 904 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 FEZ2Q9UHY8 353 aaPredicted RBP10.77□□□□□ -0.69
SMG6-213ENST00000573166 TNFSF13BQ9Y275 285 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 FAN1Q9Y2M0 1017 aa10.77□□□□□ -0.69
SMG6-213ENST00000573166 LRRD1A4D1F6 860 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 KRIT1O00522 736 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 PRRG1O14668 218 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 GAS8O95995 478 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 CCND3P30281 292 aaPredicted RBP10.76□□□□□ -0.69
SMG6-213ENST00000573166 GTF2H1P32780 548 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 ARL4AP40617 200 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 RGS7P49802 495 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 TMEM199Q8N511 208 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 CCDC89Q8N998 374 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 PARD3BQ8TEW8 1205 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 FUCA2Q9BTY2 467 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 INTS13Q9NVM9 706 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 LACTBL1A8MY62 500 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 PIK3R2O00459 728 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 ODC1P11926 461 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 CUL2Q13617 745 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 STILQ15468 1287 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 EPC2Q52LR7 807 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 EEF1DP3Q658K8 133 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 DCP1BQ8IZD4 617 aaKnown RBP10.76□□□□□ -0.69
SMG6-213ENST00000573166 CHP1Q99653 195 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.76□□□□□ -0.69
SMG6-213ENST00000573166 CYB561D2O14569 222 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 LCP1P13796 627 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 PON1P27169 355 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 SDC4P31431 198 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 PPM1FP49593 454 aaPredicted RBP10.76□□□□□ -0.69
SMG6-213ENST00000573166 FBXO47Q5MNV8 452 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 CDKAL1Q5VV42 579 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 SLC30A5Q8TAD4 765 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 TRIB2Q92519 343 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 DHX38Q92620 1227 aaKnown RBP10.76□□□□□ -0.69
SMG6-213ENST00000573166 TSPYL1Q9H0U9 437 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 CDT1Q9H211 546 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 OGFRQ9NZT2 677 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 ZNF831Q5JPB2 1677 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 PNMA6AP0CW24 399 aaPredicted RBP10.76□□□□□ -0.69
SMG6-213ENST00000573166 TM4SF4P48230 202 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 MGAT5BQ3V5L5 792 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 RSAD2Q8WXG1 361 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 DDX27Q96GQ7 796 aaKnown RBP10.76□□□□□ -0.69
SMG6-213ENST00000573166 ZIC5Q96T25 663 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 SEPT5Q99719 369 aaPredicted RBP10.76□□□□□ -0.69
SMG6-213ENST00000573166 PLEKHA4Q9H4M7 779 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 PCDHA2Q9Y5H9 948 aa10.76□□□□□ -0.69
SMG6-213ENST00000573166 ITIH6Q6UXX5 1313 aa10.75□□□□□ -0.69
SMG6-213ENST00000573166 KIF3CO14782 793 aa10.75□□□□□ -0.69
SMG6-213ENST00000573166 KRT1P04264 644 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms