RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 SLC10A6Q3KNW5 377 aa12.81□□□□□ -0.36
PRPF8-206ENST00000572723 TMEM119Q4V9L6 283 aa12.81□□□□□ -0.36
PRPF8-206ENST00000572723 ARSHQ5FYA8 562 aa12.81□□□□□ -0.36
PRPF8-206ENST00000572723 SLC8B1Q6J4K2 584 aa12.81□□□□□ -0.36
PRPF8-206ENST00000572723 PHLDB3Q6NSJ2 640 aa12.81□□□□□ -0.36
PRPF8-206ENST00000572723 C3orf58Q8NDZ4 430 aa12.81□□□□□ -0.36
PRPF8-206ENST00000572723 PLIN2Q99541 437 aa12.81□□□□□ -0.36
PRPF8-206ENST00000572723 PLEKHA5Q9HAU0 1116 aa12.81□□□□□ -0.36
PRPF8-206ENST00000572723 POLIQ9UNA4 740 aa12.81□□□□□ -0.36
PRPF8-206ENST00000572723 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.81□□□□□ -0.36
PRPF8-206ENST00000572723 CACNA1IQ9P0X4 2223 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 ARHGEF37A1IGU5 675 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 I3L4J1 428 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 TBC1D4O60343 1298 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 ELF1P32519 619 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 UBA7P41226 1012 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 NBL1P41271 181 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 NTHL1P78549 312 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 MCL1Q07820 350 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 NOLC1Q14978 699 aaKnown RBP eCLIP12.8□□□□□ -0.36
PRPF8-206ENST00000572723 KYAT1Q16773 422 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 VARS2Q5ST30 1063 aaKnown RBP12.8□□□□□ -0.36
PRPF8-206ENST00000572723 MTSS1LQ765P7 747 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 HAUS6Q7Z4H7 955 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 CCDC105Q8IYK2 499 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 DTWD2Q8NBA8 298 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 ITFG1Q8TB96 612 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 FGF13Q92913 245 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 CALML4Q96GE6 196 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 DNMT3BQ9UBC3 853 aaKnown RBP12.8□□□□□ -0.36
PRPF8-206ENST00000572723 ODF2LQ9ULJ1 636 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 NUB1Q9Y5A7 615 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 NUMBLQ9Y6R0 609 aa12.8□□□□□ -0.36
PRPF8-206ENST00000572723 MEFVO15553 781 aaPredicted RBP12.79□□□□□ -0.36
PRPF8-206ENST00000572723 GFRA3O60609 400 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 CLTAP09496 248 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 HARSP12081 509 aaKnown RBP12.79□□□□□ -0.36
PRPF8-206ENST00000572723 ATF2P15336 505 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 PTPN2P17706 415 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 RFX1P22670 979 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 NCKAP1LP55160 1127 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 PABPC1LQ4VXU2 614 aaKnown RBP12.79□□□□□ -0.36
PRPF8-206ENST00000572723 TPGS2Q68CL5 300 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 PARM1Q6UWI2 310 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 BRAPQ7Z569 592 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 APPL2Q8NEU8 664 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 GPR152Q8TDT2 470 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 FGF14Q92915 247 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 C18orf25Q96B23 403 aaPredicted RBP12.79□□□□□ -0.36
PRPF8-206ENST00000572723 SHDQ96IW2 340 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 SUSD3Q96L08 255 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 TSPAN18Q96SJ8 248 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 RPP25Q9BUL9 199 aaKnown RBP12.79□□□□□ -0.36
PRPF8-206ENST00000572723 AVENQ9NQS1 362 aaPredicted RBP12.79□□□□□ -0.36
PRPF8-206ENST00000572723 ANKFY1Q9P2R3 1169 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 CA14Q9ULX7 337 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 MAFFQ9ULX9 164 aa12.79□□□□□ -0.36
PRPF8-206ENST00000572723 PDCD11Q14690 1871 aaKnown RBP12.78□□□□□ -0.36
PRPF8-206ENST00000572723 NPHP3-ACAD11A0A0J9YXS1 232 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 TTC26A0AVF1 554 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 CYP3A5P20815 502 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 MARCKSP29966 332 aaPredicted RBP12.78□□□□□ -0.36
PRPF8-206ENST00000572723 ABCD1P33897 745 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 LONP1P36776 959 aaKnown RBP12.78□□□□□ -0.36
PRPF8-206ENST00000572723 MATR3P43243 847 aaKnown RBP eCLIP12.78□□□□□ -0.36
PRPF8-206ENST00000572723 GPC5P78333 572 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 ROR1Q01973 937 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 ZBTB6Q15916 424 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 SEZ6Q53EL9 994 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 TCEAL8Q8IYN2 117 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 MYCT1Q8N699 235 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 TBC1D32Q96NH3 1257 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 TBC1D17Q9HA65 648 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 HCFC1R1Q9NWW0 138 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 GDE1Q9NZC3 331 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 FBXL5Q9UKA1 691 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 MRPS23Q9Y3D9 190 aaKnown RBP12.78□□□□□ -0.36
PRPF8-206ENST00000572723 SIT1Q9Y3P8 196 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 MYH15Q9Y2K3 1946 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 USP34Q70CQ2 3546 aa12.78□□□□□ -0.36
PRPF8-206ENST00000572723 F5P12259 2224 aa12.77□□□□□ -0.36
PRPF8-206ENST00000572723 WDR27A2RRH5 827 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 PRRG1O14668 218 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 ZNF197O14709 1029 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 XPOTO43592 962 aaKnown RBP12.77□□□□□ -0.37
PRPF8-206ENST00000572723 MICAL2O94851 1124 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 PIGRP01833 764 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 LRG1P02750 347 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 ADRB2P07550 413 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 RHOP08100 348 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 LRPAP1P30533 357 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 MCM4P33991 863 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 DDIT3P35638 169 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 ZNF131P52739 623 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 ARPP19P56211 112 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 STARD6P59095 220 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 CACNB1Q02641 598 aaPredicted RBP12.77□□□□□ -0.37
PRPF8-206ENST00000572723 ANGPT1Q15389 498 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 CTXN3Q4LDR2 81 aa12.77□□□□□ -0.37
PRPF8-206ENST00000572723 GPBP1Q86WP2 473 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms