RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 PLCG1P19174 1290 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 HOXA9P31269 272 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 CLCN5P51795 746 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 CEBPZQ03701 1054 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 SOX4Q06945 474 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 MCL1Q07820 350 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 MCM6Q14566 821 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 CTXN3Q4LDR2 81 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 ARSHQ5FYA8 562 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 XKR4Q5GH76 650 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 VARS2Q5ST30 1063 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 RTL10Q7L3V2 364 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 ELMOD1Q8N336 334 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 SLC44A3Q8N4M1 653 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 KRI1Q8N9T8 703 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 APPL2Q8NEU8 664 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 LARP4BQ92615 738 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 RAD54LQ92698 747 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 C18orf25Q96B23 403 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 FAM212AQ96EL1 285 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 ZMAT2Q96NC0 199 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 RTP3Q9BQQ7 232 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 PLEKHA5Q9HAU0 1116 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 WNT16Q9UBV4 365 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 CDH7Q9ULB5 785 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 CA14Q9ULX7 337 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 KMT2EQ8IZD2 1858 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 GALR2O43603 387 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 CXCL8P10145 99 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 SRFP11831 508 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 CPB1P15086 417 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 PTPN2P17706 415 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 DDIT3P35638 169 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 NTHL1P78549 312 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 ROR1Q01973 937 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 SPAG1Q07617 926 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 TCF15Q12870 199 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 CUL4AQ13619 759 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 SLC10A6Q3KNW5 377 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 PABPC1LQ4VXU2 614 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 ZNF280DQ6N043 979 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 DSTYKQ6XUX3 929 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 MTSS1LQ765P7 747 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 USP37Q86T82 979 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 TMEM105Q8N8V8 129 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 C3orf58Q8NDZ4 430 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 ZNF461Q8TAF7 563 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 KIF12Q96FN5 646 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 MSTO1Q9BUK6 570 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 RPF1Q9H9Y2 349 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 CYP4F11Q9HBI6 524 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 FOXD4L1Q9NU39 408 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 FAM86C1Q9NVL1 165 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 TBX20Q9UMR3 447 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 UBQLN1Q9UMX0 589 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 MRPS23Q9Y3D9 190 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 NUMBLQ9Y6R0 609 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 MUC6Q6W4X9 2439 aa9.73□□□□□ -0.85
NPLOC4-204ENST00000570324 ZNF318Q5VUA4 2279 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 VWA8A3KMH1 1905 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 ABLIM1O14639 778 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 OGTO15294 1046 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 PAPLNO95428 1278 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 AOC1P19801 751 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 SYT1P21579 422 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 IGFBP6P24592 240 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 GRIN1Q05586 938 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 HTR4Q13639 388 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 SPECC1Q5M775 1068 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 RRAGBQ5VZM2 374 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 IQCEQ6IPM2 695 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 CD300LGQ6UXG3 332 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 RSPO2Q6UXX9 243 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 SV2BQ7L1I2 683 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 DYMQ7RTS9 669 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 ST13P5Q8NFI4 369 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 BEST2Q8NFU1 509 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 FGF13Q92913 245 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 SUSD3Q96L08 255 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 CCSER1Q9C0I3 900 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 BLOC1S4Q9NUP1 217 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 HCFC1R1Q9NWW0 138 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 TUBGCP4Q9UGJ1 667 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 CLIC4Q9Y696 253 aa9.72□□□□□ -0.85
NPLOC4-204ENST00000570324 LACTBL1A8MY62 500 aa9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 ANHXE9PGG2 379 aa9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 HSP90AA1P07900 732 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 POU2F2P09086 479 aa9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 ATF2P15336 505 aa9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 CYP3A5P20815 502 aa9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 NMT1P30419 496 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 TNFSF9P41273 254 aa9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 YWHAHQ04917 246 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 CYP4A22Q5TCH4 519 aa9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 TPGS2Q68CL5 300 aa9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 ADALQ6DHV7 355 aa9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 SLFN12LQ6IEE8 588 aa9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 SLC8B1Q6J4K2 584 aa9.71□□□□□ -0.86
NPLOC4-204ENST00000570324 PARM1Q6UWI2 310 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms