RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 ING3Q9NXR8 418 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 ABCF2Q9UG63 623 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 CPA4Q9UI42 421 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 FBXO10Q9UK96 956 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 TPCN1Q9ULQ1 816 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 CORO2BQ9UQ03 480 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 TCOF1Q13428 1488 aaKnown RBP4.53□□□□□ -1.68
UBR1-211ENST00000569971 MAGI1Q96QZ7 1491 aaPredicted RBP4.53□□□□□ -1.68
UBR1-211ENST00000569971 MIA2Q96PC5 1412 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 TONSLQ96HA7 1378 aa4.53□□□□□ -1.69
UBR1-211ENST00000569971 ZNF608Q9ULD9 1512 aaPredicted RBP4.52□□□□□ -1.69
UBR1-211ENST00000569971 MYBBP1AQ9BQG0 1328 aaKnown RBP4.52□□□□□ -1.69
UBR1-211ENST00000569971 GCC2Q8IWJ2 1684 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 GRIN2AQ12879 1464 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 CCDC189A1A4V9 331 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 KLRG2A4D1S0 409 aaPredicted RBP4.52□□□□□ -1.69
UBR1-211ENST00000569971 C2orf78A6NCI8 922 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 MROH6A6NGR9 719 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 C9orf118A6NHY6 69 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 ALDH1A2O94788 518 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 KITP10721 976 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 TYRP14679 529 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 MALP21145 153 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 POLD1P28340 1107 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 SMARCA1P28370 1054 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 SREBF1P36956 1147 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 ZNF543Q08ER8 600 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 TOP3AQ13472 1001 aaPredicted RBP4.52□□□□□ -1.69
UBR1-211ENST00000569971 TRIM68Q6AZZ1 485 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 GADL1Q6ZQY3 521 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 CLEC14AQ86T13 490 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 DPP9Q86TI2 863 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 REPS2Q8NFH8 660 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 FBXO18Q8NFZ0 1043 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 OR7D4Q8NG98 312 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 IL31RAQ8NI17 732 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 DEPTORQ8TB45 409 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 IFI44Q8TCB0 444 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 ANKS1AQ92625 1134 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 SORCS2Q96PQ0 1159 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 UHRF1Q96T88 793 aaPredicted RBP4.52□□□□□ -1.69
UBR1-211ENST00000569971 LRRC27Q9C0I9 530 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 BCO1Q9HAY6 547 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 KIAA1586Q9HCI6 787 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 SPATA6Q9NWH7 488 aaPredicted RBP4.52□□□□□ -1.69
UBR1-211ENST00000569971 CALCOCO1Q9P1Z2 691 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 PCDHA1Q9Y5I3 950 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 SNX13Q9Y5W8 968 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 KIAA0556O60303 1618 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 AKNAQ7Z591 1439 aa4.52□□□□□ -1.69
UBR1-211ENST00000569971 ZNF536O15090 1300 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 RAPGEF6Q8TEU7 1601 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 A0A1W2PPL8 197 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 DDX3XO00571 662 aaKnown RBP eCLIP4.51□□□□□ -1.69
UBR1-211ENST00000569971 PHGDHO43175 533 aaKnown RBP4.51□□□□□ -1.69
UBR1-211ENST00000569971 ADCY6O43306 1168 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 NCK2O43639 380 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 KLHL18O94889 574 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 HMGCRP04035 888 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 DDCP20711 480 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 TNFSF4P23510 183 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 PAX3P23760 479 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 HALP42357 657 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 CASP5P51878 434 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 FMO1Q01740 532 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 TLE1Q04724 770 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 ADAM15Q13444 863 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 RAB39AQ14964 217 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 PCOLCEQ15113 449 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 ZNF568Q3ZCX4 644 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 TBC1D10BQ4KMP7 808 aaPredicted RBP4.51□□□□□ -1.69
UBR1-211ENST00000569971 ANO1Q5XXA6 986 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 MCTP2Q6DN12 878 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 RTKN2Q8IZC4 609 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 LILRA3Q8N6C8 439 aaPredicted RBP4.51□□□□□ -1.69
UBR1-211ENST00000569971 CELF5Q8N6W0 485 aaKnown RBP4.51□□□□□ -1.69
UBR1-211ENST00000569971 NUDT10Q8NFP7 164 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 ZNF480Q8WV37 535 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 POF1BQ8WVV4 589 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 ZCCHC14Q8WYQ9 949 aaKnown RBP4.51□□□□□ -1.69
UBR1-211ENST00000569971 GFM2Q969S9 779 aaKnown RBP4.51□□□□□ -1.69
UBR1-211ENST00000569971 MTFMTQ96DP5 389 aaKnown RBP4.51□□□□□ -1.69
UBR1-211ENST00000569971 CYFIP2Q96F07 1278 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 NUDT11Q96G61 164 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 FAM167AQ96KS9 214 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 JADE2Q9NQC1 790 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 TRMT13Q9NUP7 481 aaKnown RBP4.51□□□□□ -1.69
UBR1-211ENST00000569971 GPRC5DQ9NZD1 345 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 TRPS1Q9UHF7 1281 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 PCDHA6Q9UN73 950 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 RBM8AQ9Y5S9 174 aaKnown RBP4.51□□□□□ -1.69
UBR1-211ENST00000569971 NAIPQ13075 1403 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 CDK13Q14004 1512 aaKnown RBP4.51□□□□□ -1.69
UBR1-211ENST00000569971 MAGI3Q5TCQ9 1506 aa4.51□□□□□ -1.69
UBR1-211ENST00000569971 SYNJ2O15056 1496 aa4.5□□□□□ -1.69
UBR1-211ENST00000569971 MYO1FO00160 1098 aa4.5□□□□□ -1.69
UBR1-211ENST00000569971 CYR61O00622 381 aa4.5□□□□□ -1.69
UBR1-211ENST00000569971 WNT10BO00744 389 aa4.5□□□□□ -1.69
UBR1-211ENST00000569971 FRS3O43559 492 aa4.5□□□□□ -1.69
UBR1-211ENST00000569971 PIP5K1CO60331 668 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms