RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 EPHB4P54760 987 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 WDR5P61964 334 aaKnown RBP11.31□□□□□ -0.6
CDH3-210ENST00000569117 MAN2A1Q16706 1144 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 DCAF17Q5H9S7 520 aaPredicted RBP11.31□□□□□ -0.6
CDH3-210ENST00000569117 TMEM240Q5SV17 173 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 C1orf220Q5T0J3 134 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 SWT1Q5T5J6 900 aaKnown RBP11.31□□□□□ -0.6
CDH3-210ENST00000569117 ALKAL1Q6UXT8 129 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 C16orf59Q7L2K0 433 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 NT5DC4Q86YG4 428 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 WDR49Q8IV35 697 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 EFCAB13Q8IY85 973 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 LPPQ93052 612 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 TSPAN18Q96SJ8 248 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 TUBGCP2Q9BSJ2 902 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 APOL6Q9BWW8 343 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 PDE11AQ9HCR9 933 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 DERAQ9Y315 318 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 C2CD2Q9Y426 696 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDH3-210ENST00000569117 PTPRJQ12913 1337 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 KIAA1671Q9BY89 1806 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 ARL5CA6NH57 179 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 LRRC10BA6NIK2 292 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 PTGESO14684 152 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 STX10O60499 249 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 AMHP03971 560 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 NFICP08651 508 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 TRIM49P0CI25 452 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 TRIM49CP0CI26 452 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 DLATP10515 647 aaKnown RBP11.3□□□□□ -0.6
CDH3-210ENST00000569117 KCNE1P15382 129 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 CDK11BP21127 795 aaKnown RBP11.3□□□□□ -0.6
CDH3-210ENST00000569117 COPB1P53618 953 aaKnown RBP11.3□□□□□ -0.6
CDH3-210ENST00000569117 DLG4P78352 724 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 UVSSAQ2YD98 709 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 MIIPQ5JXC2 388 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 CLLU1OSQ5K130 101 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 TCERG1LQ5VWI1 586 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 JADE1Q6IE81 842 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 SARM1Q6SZW1 724 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.3□□□□□ -0.6
CDH3-210ENST00000569117 ZNF365Q70YC5 407 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 RNF169Q8NCN4 708 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 HERVK_113Q902F9 699 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 CCDC127Q96BQ5 260 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 ZFP42Q96MM3 310 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 FNBP1Q96RU3 617 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 RPS6KC1Q96S38 1066 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.3□□□□□ -0.6
CDH3-210ENST00000569117 RNF19AQ9NV58 838 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 TAB2Q9NYJ8 693 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 PARP2Q9UGN5 583 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.3□□□□□ -0.6
CDH3-210ENST00000569117 CEP290O15078 2479 aa11.3□□□□□ -0.6
CDH3-210ENST00000569117 GOLGA6L3A6NEY3 463 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 LGALS16A8MUM7 142 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 LACTBL1A8MY62 500 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 N4BP1O75113 896 aaKnown RBP11.29□□□□□ -0.6
CDH3-210ENST00000569117 FGBP02675 491 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 AFPP02771 609 aaKnown RBP11.29□□□□□ -0.6
CDH3-210ENST00000569117 TPM2P07951 284 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 FGFR1P11362 822 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 GTF2H1P32780 548 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 MAGEA10P43363 369 aaPredicted RBP11.29□□□□□ -0.6
CDH3-210ENST00000569117 KCNJ6P48051 423 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 MXI1P50539 228 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 AP3M2P53677 418 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 DEFB103AP81534 67 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 FANCCQ00597 558 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 PPP3CAQ08209 521 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 KCNH2Q12809 1159 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 GRIK3Q13003 919 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 TMEM132DQ14C87 1099 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 NR6A1Q15406 480 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 VWA3BQ502W6 1294 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 GLB1LQ6UWU2 654 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 OTOP2Q7RTS6 562 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 GSTCDQ8NEC7 633 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 TOP1MTQ969P6 601 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 ZMAT2Q96NC0 199 aaKnown RBP11.29□□□□□ -0.6
CDH3-210ENST00000569117 PPP1R10Q96QC0 940 aaKnown RBP11.29□□□□□ -0.6
CDH3-210ENST00000569117 GAD1Q99259 594 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 MTMR12Q9C0I1 747 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 CXCL16Q9H2A7 254 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 MTIF3Q9H2K0 278 aaKnown RBP11.29□□□□□ -0.6
CDH3-210ENST00000569117 NDST4Q9H3R1 872 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 RC3H2Q9HBD1 1191 aaKnown RBP11.29□□□□□ -0.6
CDH3-210ENST00000569117 TMEM8AQ9HCN3 771 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 INTS13Q9NVM9 706 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 KLK14Q9P0G3 267 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 LRFN2Q9ULH4 789 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 PCDHB7Q9Y5E2 793 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 TNRC18O15417 2968 aaPredicted RBP11.29□□□□□ -0.6
CDH3-210ENST00000569117 GBF1Q92538 1859 aa11.29□□□□□ -0.6
CDH3-210ENST00000569117 A0A1B0GTH6 734 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 SMIM28A0A1B0GU29 152 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 GTPBP10A4D1E9 387 aaKnown RBP11.28□□□□□ -0.6
CDH3-210ENST00000569117 PMM2O15305 246 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 P4HA2O15460 535 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms