RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 LDAHQ9H6V9 325 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 BCO1Q9HAY6 547 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 RRP7BPQ9NSQ0 103 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 AURKAIP1Q9NWT8 199 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 EIF2AK4Q9P2K8 1649 aaKnown RBP4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 ARHGAP23Q9P227 1491 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 TNKSO95271 1327 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 MSH6P52701 1360 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 ARHGEF5Q12774 1597 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 TBKBP1A7MCY6 615 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 GOLGA6L6A8MZA4 724 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 LEFTY2O00292 366 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 ALOX15P16050 662 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 FPR1P21462 350 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 C5AR1P21730 350 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 ECHS1P30084 290 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 GUCY1A2P33402 732 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 MGAT2Q10469 447 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 ODF1Q14990 250 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 VPS72Q15906 364 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 RABL3Q5HYI8 236 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 METTL24Q5JXM2 366 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 ZNF772Q68DY9 489 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 ZNF572Q7Z3I7 529 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 CERS3Q8IU89 383 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 PQLC1Q8N2U9 271 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 NRG4Q8WWG1 115 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 STON2Q8WXE9 905 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 DPF2Q92785 391 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 FUBP3Q96I24 572 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 ADI1Q9BV57 179 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 ZNF341Q9BYN7 854 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 ASPSCR1Q9BZE9 553 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 SCAND2PQ9GZW5 306 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 CSRNP2Q9H175 543 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 MKS1Q9NXB0 559 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 DNM3Q9UQ16 869 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 HDAC5Q9UQL6 1122 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 AFF2P51816 1311 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 PNPLA7Q6ZV29 1317 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 PRDM15P57071 1507 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 EFCAB6Q5THR3 1501 aa4.41□□□□□ -1.7
HMGB1P6-201ENST00000569046 TMEM2Q9UHN6 1383 aa4.4□□□□□ -1.7
HMGB1P6-201ENST00000569046 MAST1Q9Y2H9 1570 aa4.4□□□□□ -1.7
HMGB1P6-201ENST00000569046 RGS12O14924 1447 aa4.4□□□□□ -1.7
HMGB1P6-201ENST00000569046 BRWD3Q6RI45 1802 aa4.4□□□□□ -1.7
HMGB1P6-201ENST00000569046 CXorf49A8MYA2 514 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 ALG1L2C9J202 215 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 NARSO43776 548 aaKnown RBP4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 NDUFS2O75306 463 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 NR4A1P22736 598 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 APOBEC3AP31941 199 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 FLT3LGP49771 235 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 ACAP2Q15057 778 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 BMT2Q1RMZ1 405 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 LSM12Q3MHD2 195 aaKnown RBP4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 FAM47AQ5JRC9 791 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 RNF169Q8NCN4 708 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 BRINP2Q9C0B6 783 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZNF768Q9H5H4 540 aaKnown RBP4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 SPON1Q9HCB6 807 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 SLC2A4RGQ9NR83 387 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 PARPBPQ9NWS1 579 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 SORCS3Q9UPU3 1222 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 NOP58Q9Y2X3 529 aaKnown RBP4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 HS3ST3A1Q9Y663 406 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 CROCC2H7BZ55 1655 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 DIP2AQ14689 1571 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 NWD1Q149M9 1564 aa4.4□□□□□ -1.71
HMGB1P6-201ENST00000569046 LRRC9Q6ZRR7 1453 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 SHTN1A0MZ66 631 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 AHRRA9YTQ3 701 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 PRR5-ARHGAP8B1AHC4 643 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 B5MCH6 92 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 XPOTO43592 962 aaKnown RBP4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 AKAP8O43823 692 aaKnown RBP4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 PARNO95453 639 aaKnown RBP4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 FSHBP01225 129 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 AMY1AP04745 511 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 IBSPP21815 317 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZFP36P26651 326 aaKnown RBP4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 PCSK1P29120 753 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 ACVRL1P37023 503 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 PER3P56645 1201 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 TUBA3CQ13748 450 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 BRDTQ58F21 947 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 AFMIDQ63HM1 303 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 METRNLQ641Q3 311 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 TUBA3EQ6PEY2 450 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 PDZD4Q76G19 769 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZGPATQ8N5A5 531 aaKnown RBP4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 SLC16A11Q8NCK7 471 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 OR10H5Q8NGA6 315 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZCRB1Q8TBF4 217 aaKnown RBP4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 RAB24Q969Q5 203 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 TEKT5Q96M29 485 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 UHRF1Q96T88 793 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 NEU1Q99519 415 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 SMAD5Q99717 465 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms