RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 PANK4Q9NVE7 773 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 TUBGCP4Q9UGJ1 667 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 ADAM28Q9UKQ2 775 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 IRAK3Q9Y616 596 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 ZFHX2Q9C0A1 2572 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-211ENST00000568291 A0A1B0GVL5 298 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 LACTBL1A8MY62 500 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 H0Y858 1186 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 TEX28O15482 410 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 ADAM12O43184 909 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 B3GAT3O94766 335 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 PRPF6O94906 941 aaKnown RBP10.37□□□□□ -0.75
SF3B3-211ENST00000568291 GCNT3O95395 438 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 EFEMP2O95967 443 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 SOD2P04179 222 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 GLUD2P49448 558 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 ACOT2P49753 483 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 CDR1P51861 262 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 GTF2BQ00403 316 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 MCL1Q07820 350 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 NOLC1Q14978 699 aaKnown RBP eCLIP10.37□□□□□ -0.75
SF3B3-211ENST00000568291 ATAT1Q5SQI0 421 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 FAM171A1Q5VUB5 890 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 KIAA0319Q5VV43 1072 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 RESP18Q5W5W9 173 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 TMC5Q6UXY8 1006 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 ZPBP2Q6X784 338 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 CCDC149Q6ZUS6 474 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 PPFIBP1Q86W92 1011 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 ZDHHC14Q8IZN3 488 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 TMEM105Q8N8V8 129 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 KCNG4Q8TDN1 519 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 NOC3LQ8WTT2 800 aaKnown RBP10.37□□□□□ -0.75
SF3B3-211ENST00000568291 LEO1Q8WVC0 666 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-211ENST00000568291 SNX27Q96L92 541 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 MSTO1Q9BUK6 570 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 HERC2P3Q9BVR0 1158 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 MFSD1Q9H3U5 465 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 MRPL17Q9NRX2 175 aaKnown RBP10.37□□□□□ -0.75
SF3B3-211ENST00000568291 SERTAD1Q9UHV2 236 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 CFAP45Q9UL16 551 aa10.37□□□□□ -0.75
SF3B3-211ENST00000568291 SPTBN4Q9H254 2564 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 A0A0B4J269 797 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 GOLGA8IPA6NC78 632 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 GOLGA8JA6NMD2 632 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 URODP06132 367 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 CUL4BQ13620 913 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 BECN1Q14457 450 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 ENOX2Q16206 610 aaKnown RBP10.36□□□□□ -0.75
SF3B3-211ENST00000568291 UPP1Q16831 310 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 SCARA3Q6AZY7 606 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 APBB1IPQ7Z5R6 666 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-211ENST00000568291 RNF168Q8IYW5 571 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-211ENST00000568291 PLCD3Q8N3E9 789 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 SAAL1Q96ER3 474 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 SPATA32Q96LK8 384 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 EMILIN2Q9BXX0 1053 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 PCIF1Q9H4Z3 704 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 TOPORSQ9NS56 1045 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-211ENST00000568291 CHST7Q9NS84 486 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 LIMD1Q9UGP4 676 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 KCNG1Q9UIX4 513 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 USTQ9Y2C2 406 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 MORC2Q9Y6X9 1032 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-211ENST00000568291 DOCK6Q96HP0 2047 aa10.36□□□□□ -0.75
SF3B3-211ENST00000568291 MIA3Q5JRA6 1907 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 MYH15Q9Y2K3 1946 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 H0YCG3 227 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 PODXLO00592 558 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 PPEF2O14830 753 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 FAM189A1O60320 539 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 PPP1R37O75864 691 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 GABBR2O75899 941 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 CLTAP09496 248 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 PFKFB1P16118 471 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 TKTP29401 623 aaKnown RBP10.35□□□□□ -0.75
SF3B3-211ENST00000568291 ADSSP30520 456 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 CLCN4P51793 760 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 WNT7BP56706 349 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 ASIC1P78348 528 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 DSG1Q02413 1049 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 USP41Q3LFD5 358 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 XKR4Q5GH76 650 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 CWF19L1Q69YN2 538 aaKnown RBP10.35□□□□□ -0.75
SF3B3-211ENST00000568291 ADALQ6DHV7 355 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 ASTLQ6HA08 431 aaPredicted RBP10.35□□□□□ -0.75
SF3B3-211ENST00000568291 DCLRE1AQ6PJP8 1040 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 RSPO2Q6UXX9 243 aaPredicted RBP10.35□□□□□ -0.75
SF3B3-211ENST00000568291 GPR149Q86SP6 731 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 MAP4K3Q8IVH8 894 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 IQUBQ8NA54 791 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 ST13P5Q8NFI4 369 aaPredicted RBP10.35□□□□□ -0.75
SF3B3-211ENST00000568291 ACSF2Q96CM8 615 aaPredicted RBP10.35□□□□□ -0.75
SF3B3-211ENST00000568291 KIF12Q96FN5 646 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 STRA6Q9BX79 667 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 TRIM9Q9C026 710 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 KBTBD4Q9NVX7 518 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 FAM13BQ9NYF5 915 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 CNTN3Q9P232 1028 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 STK39Q9UEW8 545 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms