RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 GJA10Q969M2 543 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 E2F7Q96AV8 911 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 CEP170P1Q96L14 293 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 LRRC2Q9BYS8 371 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 ZMYND12Q9H0C1 365 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 TMEM9BQ9NQ34 198 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 GPSM3Q9Y4H4 160 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 PPME1Q9Y570 386 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 WDFY3Q8IZQ1 3526 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 FLNBO75369 2602 aaKnown RBP15.29■□□□□ 0.04
SMG1-213ENST00000567737 LNP1A1A4G5 178 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 ARHGEF37A1IGU5 675 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 MYBPHLA2RUH7 354 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 HEPACAM2A8MVW5 462 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 ADAMTS3O15072 1205 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 CHADO15335 359 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 EXTL3O43909 919 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 PSMD10O75832 226 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 RHOBTB1O94844 696 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 CTHP32929 405 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 NPEPPSP55786 919 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 WDR44Q5JSH3 913 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 TXNDC11Q6PKC3 985 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 FERMT3Q86UX7 667 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 RALGPS2Q86X27 583 aaPredicted RBP15.29■□□□□ 0.04
SMG1-213ENST00000567737 PROSER1Q86XN7 944 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 ZSCAN18Q8TBC5 510 aaPredicted RBP15.29■□□□□ 0.04
SMG1-213ENST00000567737 ZSWIM3Q96MP5 696 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 DHX33Q9H6R0 707 aaKnown RBP15.29■□□□□ 0.04
SMG1-213ENST00000567737 TRPV4Q9HBA0 871 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 KLK13Q9UKR3 277 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 SLC8A2Q9UPR5 921 aa15.29■□□□□ 0.04
SMG1-213ENST00000567737 RBM8AQ9Y5S9 174 aaKnown RBP15.29■□□□□ 0.04
SMG1-213ENST00000567737 LAMA1P25391 3075 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 ASH1LQ9NR48 2969 aaKnown RBP15.28■□□□□ 0.04
SMG1-213ENST00000567737 NPTXRO95502 500 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 ARF4P18085 180 aaPredicted RBP15.28■□□□□ 0.04
SMG1-213ENST00000567737 FGFR3P22607 806 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 GNA11P29992 359 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 CCR2P41597 374 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 FGD1P98174 961 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 CCINQ13939 588 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 PON2Q15165 354 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 PFKFB3Q16875 520 aaPredicted RBP15.28■□□□□ 0.04
SMG1-213ENST00000567737 IQCEQ6IPM2 695 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 APOA5Q6Q788 366 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 SMC5Q8IY18 1101 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 ELMOD1Q8N336 334 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 DEFB124Q8NES8 71 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 BACE2Q9Y5Z0 518 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 AKAP13Q12802 2813 aa15.28■□□□□ 0.04
SMG1-213ENST00000567737 ADAMTS20P59510 1910 aa15.27■□□□□ 0.04
SMG1-213ENST00000567737 SPAG17Q6Q759 2223 aa15.27■□□□□ 0.04
SMG1-213ENST00000567737 BCLAF3A2AJT9 711 aaKnown RBP15.27■□□□□ 0.04
SMG1-213ENST00000567737 DKC1O60832 514 aaKnown RBP eCLIP15.27■□□□□ 0.04
SMG1-213ENST00000567737 ATG13O75143 517 aa15.27■□□□□ 0.04
SMG1-213ENST00000567737 PTENP60484 403 aa15.27■□□□□ 0.04
SMG1-213ENST00000567737 NUCB1Q02818 461 aa15.27■□□□□ 0.04
SMG1-213ENST00000567737 TFDP1Q14186 410 aa15.27■□□□□ 0.04
SMG1-213ENST00000567737 SLC27A1Q6PCB7 646 aa15.27■□□□□ 0.04
SMG1-213ENST00000567737 ANKS3Q6ZW76 656 aa15.27■□□□□ 0.04
SMG1-213ENST00000567737 ZNF461Q8TAF7 563 aa15.27■□□□□ 0.04
SMG1-213ENST00000567737 KCNV2Q8TDN2 545 aa15.27■□□□□ 0.04
SMG1-213ENST00000567737 DUSP15Q9H1R2 295 aaPredicted RBP15.27■□□□□ 0.04
SMG1-213ENST00000567737 SLC32A1Q9H598 525 aa15.27■□□□□ 0.04
SMG1-213ENST00000567737 SLITRK6Q9H5Y7 841 aa15.27■□□□□ 0.04
SMG1-213ENST00000567737 NCANO14594 1321 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 KHNYNO15037 678 aaKnown RBP15.26■□□□□ 0.03
SMG1-213ENST00000567737 ZBTB43O43298 467 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 THP07101 528 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 MYL4P12829 197 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 RDXP35241 583 aaKnown RBP15.26■□□□□ 0.03
SMG1-213ENST00000567737 USP11P51784 963 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 MXD4Q14582 209 aaPredicted RBP15.26■□□□□ 0.03
SMG1-213ENST00000567737 EMC2Q15006 297 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 KARSQ15046 597 aaKnown RBP15.26■□□□□ 0.03
SMG1-213ENST00000567737 COL28A1Q2UY09 1125 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 UAP1L1Q3KQV9 507 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 B3GNT9Q6UX72 402 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 CDR2LQ86X02 465 aaPredicted RBP15.26■□□□□ 0.03
SMG1-213ENST00000567737 CAMKK1Q8N5S9 505 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 LEMD2Q8NC56 503 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 TTC8Q8TAM2 541 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 BICD2Q8TD16 824 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 ZNF512Q96ME7 567 aaPredicted RBP15.26■□□□□ 0.03
SMG1-213ENST00000567737 MKNK1Q9BUB5 465 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 GPR88Q9GZN0 384 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 CYP4F11Q9HBI6 524 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 INSL5Q9Y5Q6 135 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 LOC400499M0QZD8 3231 aa15.26■□□□□ 0.03
SMG1-213ENST00000567737 PDCD11Q14690 1871 aaKnown RBP15.25■□□□□ 0.03
SMG1-213ENST00000567737 GOLGA8AA7E2F4 631 aa15.25■□□□□ 0.03
SMG1-213ENST00000567737 GOLGA8BA8MQT2 603 aa15.25■□□□□ 0.03
SMG1-213ENST00000567737 SGSM2O43147 1006 aa15.25■□□□□ 0.03
SMG1-213ENST00000567737 ATF2P15336 505 aa15.25■□□□□ 0.03
SMG1-213ENST00000567737 GJA1P17302 382 aa15.25■□□□□ 0.03
SMG1-213ENST00000567737 CHMLP26374 656 aa15.25■□□□□ 0.03
SMG1-213ENST00000567737 TKTP29401 623 aaKnown RBP15.25■□□□□ 0.03
SMG1-213ENST00000567737 QARSP47897 775 aaKnown RBP15.25■□□□□ 0.03
SMG1-213ENST00000567737 ROR1Q01973 937 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms