RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 CWF19L1Q69YN2 538 aaKnown RBP10.1□□□□□ -0.79
CDH13-210ENST00000567445 RNF19BQ6ZMZ0 732 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 SIX5Q8N196 739 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 FLCNQ8NFG4 579 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 PIK3R5Q8WYR1 880 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 NXPE3Q969Y0 559 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 MYADMQ96S97 322 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 CLSTN3Q9BQT9 956 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 KIFC3Q9BVG8 833 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 CXCL16Q9H2A7 254 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 GDPD2Q9HCC8 539 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 WNT16Q9UBV4 365 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 KIAA1024Q9UPX6 916 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 USP20Q9Y2K6 914 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 FCF1Q9Y324 198 aaKnown RBP10.1□□□□□ -0.79
CDH13-210ENST00000567445 CFAP54Q96N23 3096 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 PROB1E7EW31 1015 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 NARSO43776 548 aaKnown RBP10.1□□□□□ -0.79
CDH13-210ENST00000567445 NPR3P17342 541 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 AOC1P19801 751 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 U2AF2P26368 475 aaKnown RBP eCLIP10.1□□□□□ -0.79
CDH13-210ENST00000567445 RPIAP49247 311 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 PSMD5Q16401 504 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 NT5DC1Q5TFE4 455 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 ATF7IP2Q5U623 682 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 PDXDC1Q6P996 788 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 APBB1IPQ7Z5R6 666 aaPredicted RBP10.1□□□□□ -0.79
CDH13-210ENST00000567445 CEP57Q86XR8 500 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 IGSF22Q8N9C0 903 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 LNX1Q8TBB1 728 aaPredicted RBP10.1□□□□□ -0.79
CDH13-210ENST00000567445 RSAD2Q8WXG1 361 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 RAB34Q9BZG1 259 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 POLD4Q9HCU8 107 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 DDX19AQ9NUU7 478 aaKnown RBP10.1□□□□□ -0.79
CDH13-210ENST00000567445 FBXW11Q9UKB1 542 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 GDAQ9Y2T3 454 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 RIF1Q5UIP0 2472 aaKnown RBP10.1□□□□□ -0.79
CDH13-210ENST00000567445 CCDC169A6NNP5 214 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 TMEM189-UBE2V1I3L0A0 370 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 K7ERI5 159 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 LAD1O00515 517 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 PI15O43692 258 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 HNRNPA1P09651 372 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDH13-210ENST00000567445 SRFP11831 508 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 LAMP2P13473 410 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 CDK11BP21127 795 aaKnown RBP10.09□□□□□ -0.79
CDH13-210ENST00000567445 TOB1P50616 345 aaPredicted RBP10.09□□□□□ -0.79
CDH13-210ENST00000567445 LIN9Q5TKA1 542 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.09□□□□□ -0.79
CDH13-210ENST00000567445 SND1Q7KZF4 910 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDH13-210ENST00000567445 GET4Q7L5D6 327 aaPredicted RBP10.09□□□□□ -0.79
CDH13-210ENST00000567445 SLC44A3Q8N4M1 653 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 SNX29Q8TEQ0 813 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 PPP1R10Q96QC0 940 aaKnown RBP10.09□□□□□ -0.79
CDH13-210ENST00000567445 KIF2CQ99661 725 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 RTP3Q9BQQ7 232 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 DNM3Q9UQ16 869 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 TNFSF13BQ9Y275 285 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 PCDHB6Q9Y5E3 794 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 ZFP37Q9Y6Q3 630 aaPredicted RBP10.09□□□□□ -0.79
CDH13-210ENST00000567445 VPS13AQ96RL7 3174 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 DOCK6Q96HP0 2047 aa10.09□□□□□ -0.79
CDH13-210ENST00000567445 VWA8A3KMH1 1905 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 ANHXE9PGG2 379 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 GDF9O60383 454 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 B3GAT3O94766 335 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 FGFR3P22607 806 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 FSHRP23945 695 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 HOXA9P31269 272 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 PRPHP41219 470 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 NBL1P41271 181 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 NPTX2P47972 431 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 DMP1Q13316 513 aaPredicted RBP10.08□□□□□ -0.8
CDH13-210ENST00000567445 HTR4Q13639 388 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 GLRA4Q5JXX5 417 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 PPM1LQ5SGD2 360 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 KRT79Q5XKE5 535 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 DCLRE1AQ6PJP8 1040 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 CCDC105Q8IYK2 499 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 UROC1Q96N76 676 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 PRDM9Q9NQV7 894 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 TOPORSQ9NS56 1045 aaPredicted RBP10.08□□□□□ -0.8
CDH13-210ENST00000567445 TRIP11Q15643 1979 aa10.08□□□□□ -0.8
CDH13-210ENST00000567445 FAM186AA6NE01 2351 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 PHLPP2Q6ZVD8 1323 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 DMDP11532 3685 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 SMIM28A0A1B0GU29 152 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 KRBA1A5PL33 1030 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 E9PMD0 336 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 ADAM12O43184 909 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 TRAPPC3O43617 180 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 HIP1RO75146 1068 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 XYLBO75191 536 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 C8AP07357 584 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 OR1D2P34982 312 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 GRM5P41594 1212 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 CLCNKBP51801 687 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 YARSP54577 528 aaKnown RBP10.07□□□□□ -0.8
CDH13-210ENST00000567445 PEX3P56589 373 aa10.07□□□□□ -0.8
CDH13-210ENST00000567445 RAB33AQ14088 237 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms