RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SEMA4DQ92854 862 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 SLC10A4Q96EP9 437 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 TRIM11Q96F44 468 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 ADAM7Q9H2U9 754 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 LRRC4CQ9HCJ2 640 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 NFASCO94856 1347 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 VGLL3A8MV65 326 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 CNMDO75829 334 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 MYBL1P10243 752 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 CHN1P15882 459 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 CNGA1P29973 690 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 GJA5P36382 358 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 SLC1A1P43005 524 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 GTF2A1P52655 376 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-213ENST00000566756 MAP2K1Q02750 393 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-213ENST00000566756 DMP1Q13316 513 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-213ENST00000566756 ITIH4Q14624 930 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 GNPTABQ3T906 1256 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 ANKRD20A8PQ5CZ79 823 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 MAP1SQ66K74 1059 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-213ENST00000566756 TAOK1Q7L7X3 1001 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 CBWD2Q8IUF1 395 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 OSBPL7Q9BZF2 842 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 SEMA4AQ9H3S1 761 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 RAB20Q9NX57 234 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 PKD2L1Q9P0L9 805 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 TCEAL9Q9UHQ7 104 aa17.91■□□□□ 0.46
CMTM3-213ENST00000566756 RGS20O76081 388 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 RTP1P59025 263 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 CALCOCO2Q13137 446 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 CLEC16AQ2KHT3 1053 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 ZSWIM2Q8NEG5 633 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 DHX38Q92620 1227 aaKnown RBP17.9■□□□□ 0.46
CMTM3-213ENST00000566756 MOV10L1Q9BXT6 1211 aaKnown RBP17.9■□□□□ 0.46
CMTM3-213ENST00000566756 DKC1O60832 514 aaKnown RBP eCLIP17.9■□□□□ 0.46
CMTM3-213ENST00000566756 KCNA2P16389 499 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 ITIH2P19823 946 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 GARTP22102 1010 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 ICAM3P32942 547 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 NPTX2P47972 431 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 CAV1Q03135 178 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 PTP4A2Q12974 167 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 UGCGQ16739 394 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 XKR9Q5GH70 373 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 PIGWQ7Z7B1 504 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 CCDC197Q8NCU1 140 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 AZI2Q9H6S1 392 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 RBPJLQ9UBG7 517 aa17.9■□□□□ 0.46
CMTM3-213ENST00000566756 ZNFX1Q9P2E3 1918 aaKnown RBP17.89■□□□□ 0.45
CMTM3-213ENST00000566756 SPATA31C2B4DYI2 1134 aa17.89■□□□□ 0.45
CMTM3-213ENST00000566756 ANKRD63C9JTQ0 380 aa17.89■□□□□ 0.45
CMTM3-213ENST00000566756 RASGRF2O14827 1237 aa17.89■□□□□ 0.45
CMTM3-213ENST00000566756 CYP24A1Q07973 514 aa17.89■□□□□ 0.45
CMTM3-213ENST00000566756 STXBP2Q15833 593 aa17.89■□□□□ 0.45
CMTM3-213ENST00000566756 FAM102BQ5T8I3 360 aa17.89■□□□□ 0.45
CMTM3-213ENST00000566756 OTUD6AQ7L8S5 288 aa17.89■□□□□ 0.45
CMTM3-213ENST00000566756 ANKS4BQ8N8V4 417 aa17.89■□□□□ 0.45
CMTM3-213ENST00000566756 GRK7Q8WTQ7 553 aa17.89■□□□□ 0.45
CMTM3-213ENST00000566756 GTF3C2Q8WUA4 911 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-213ENST00000566756 CCT6BQ92526 530 aa17.89■□□□□ 0.45
CMTM3-213ENST00000566756 DOCK5Q9H7D0 1870 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 GOLGA8IPA6NC78 632 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 GOLGA8JA6NMD2 632 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 ATMINO43313 823 aaPredicted RBP17.88■□□□□ 0.45
CMTM3-213ENST00000566756 EDNRBP24530 442 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 ATP5DP30049 168 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 RHBDF2Q6PJF5 856 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 NCAPG2Q86XI2 1143 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 MDM1Q8TC05 714 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 KCNN1Q92952 543 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 CCDC114Q96M63 670 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 SERPINB12Q96P63 405 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 GPRC5CQ9NQ84 441 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 KMT5AQ9NQR1 393 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 HOMER3Q9NSC5 361 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 INTS9Q9NV88 658 aaKnown RBP17.88■□□□□ 0.45
CMTM3-213ENST00000566756 KCNG1Q9UIX4 513 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 SLC45A1Q9Y2W3 748 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 TCRBV7S2A1N4TA0A589 114 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 DENND3A2RUS2 1198 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 H0YCG3 227 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 DNAJC8O75937 253 aaPredicted RBP17.88■□□□□ 0.45
CMTM3-213ENST00000566756 CCNE2O96020 404 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 GSTA1P08263 222 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 UNGP13051 313 aaPredicted RBP17.88■□□□□ 0.45
CMTM3-213ENST00000566756 SCP2P22307 547 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 ALDH5A1P51649 535 aaPredicted RBP17.88■□□□□ 0.45
CMTM3-213ENST00000566756 BPIFB4P59827 614 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 AUHQ13825 339 aaKnown RBP17.88■□□□□ 0.45
CMTM3-213ENST00000566756 PPP1R7Q15435 360 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 BRDTQ58F21 947 aaPredicted RBP17.88■□□□□ 0.45
CMTM3-213ENST00000566756 CCDC50Q8IVM0 306 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 TAS1R2Q8TE23 839 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 NSRP1Q9H0G5 558 aaKnown RBP17.88■□□□□ 0.45
CMTM3-213ENST00000566756 KIAA1586Q9HCI6 787 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 PNMA3Q9UL41 463 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 PCDHA10Q9Y5I2 948 aa17.88■□□□□ 0.45
CMTM3-213ENST00000566756 MYH9P35579 1960 aaKnown RBP17.87■□□□□ 0.45
CMTM3-213ENST00000566756 LRRC37A2A6NM11 1700 aa17.87■□□□□ 0.45
CMTM3-213ENST00000566756 TLDC2A0PJX2 215 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms