RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 PRKCQQ04759 706 aa16.4■□□□□ 0.22
RNF40-209ENST00000566703 MRPL58Q14197 206 aaKnown RBP16.4■□□□□ 0.22
RNF40-209ENST00000566703 PABPC1LQ4VXU2 614 aaKnown RBP16.4■□□□□ 0.22
RNF40-209ENST00000566703 VARS2Q5ST30 1063 aaKnown RBP16.4■□□□□ 0.22
RNF40-209ENST00000566703 MCTP1Q6DN14 999 aa16.4■□□□□ 0.22
RNF40-209ENST00000566703 PNMA5Q96PV4 448 aa16.4■□□□□ 0.22
RNF40-209ENST00000566703 PLEKHA5Q9HAU0 1116 aa16.4■□□□□ 0.22
RNF40-209ENST00000566703 GDE1Q9NZC3 331 aa16.4■□□□□ 0.22
RNF40-209ENST00000566703 DLGAP2Q9P1A6 1054 aa16.4■□□□□ 0.22
RNF40-209ENST00000566703 NUB1Q9Y5A7 615 aa16.4■□□□□ 0.22
RNF40-209ENST00000566703 WDFY4Q6ZS81 3184 aa16.39■□□□□ 0.21
RNF40-209ENST00000566703 I3L4J1 428 aa16.39■□□□□ 0.21
RNF40-209ENST00000566703 MAPTP10636 758 aaKnown RBP16.39■□□□□ 0.21
RNF40-209ENST00000566703 PTPN2P17706 415 aa16.39■□□□□ 0.21
RNF40-209ENST00000566703 ROR1Q01973 937 aa16.39■□□□□ 0.21
RNF40-209ENST00000566703 MCL1Q07820 350 aa16.39■□□□□ 0.21
RNF40-209ENST00000566703 TPGS2Q68CL5 300 aa16.39■□□□□ 0.21
RNF40-209ENST00000566703 NPAS3Q8IXF0 933 aa16.39■□□□□ 0.21
RNF40-209ENST00000566703 TMEM161BQ8NDZ6 487 aa16.39■□□□□ 0.21
RNF40-209ENST00000566703 APPL2Q8NEU8 664 aa16.39■□□□□ 0.21
RNF40-209ENST00000566703 ZBTB45Q96K62 511 aaPredicted RBP16.39■□□□□ 0.21
RNF40-209ENST00000566703 SUSD3Q96L08 255 aa16.39■□□□□ 0.21
RNF40-209ENST00000566703 OSBPL6Q9BZF3 934 aa16.39■□□□□ 0.21
RNF40-209ENST00000566703 HCFC1R1Q9NWW0 138 aa16.39■□□□□ 0.21
RNF40-209ENST00000566703 LARSQ9P2J5 1176 aaKnown RBP16.39■□□□□ 0.21
RNF40-209ENST00000566703 MRPS23Q9Y3D9 190 aaKnown RBP16.39■□□□□ 0.21
RNF40-209ENST00000566703 KANSL1LA0AUZ9 987 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 CLDN3O15551 220 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 MICAL2O94851 1124 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 LRG1P02750 347 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 RHOP08100 348 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 PLA2G4BP0C869 781 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 MCM2P49736 904 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 SLC12A3P55017 1021 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 NOLC1Q14978 699 aaKnown RBP eCLIP16.38■□□□□ 0.21
RNF40-209ENST00000566703 KYAT1Q16773 422 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 SLC10A6Q3KNW5 377 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 SLC44A4Q53GD3 710 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 TCEAL8Q8IYN2 117 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 PJA1Q8NG27 643 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 BORCS6Q96GS4 357 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 CDK5RAP3Q96JB5 506 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 TMX3Q96JJ7 454 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 AK8Q96MA6 479 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 TSPAN18Q96SJ8 248 aa16.38■□□□□ 0.21
RNF40-209ENST00000566703 DDX23Q9BUQ8 820 aaKnown RBP16.38■□□□□ 0.21
RNF40-209ENST00000566703 H3BQV1 296 aa16.37■□□□□ 0.21
RNF40-209ENST00000566703 PRRG1O14668 218 aa16.37■□□□□ 0.21
RNF40-209ENST00000566703 ZNF197O14709 1029 aa16.37■□□□□ 0.21
RNF40-209ENST00000566703 ECI2O75521 394 aa16.37■□□□□ 0.21
RNF40-209ENST00000566703 DCNP07585 359 aaKnown RBP16.37■□□□□ 0.21
RNF40-209ENST00000566703 CLTAP09496 248 aa16.37■□□□□ 0.21
RNF40-209ENST00000566703 ZRSR1Q15695 479 aaKnown RBP16.37■□□□□ 0.21
RNF40-209ENST00000566703 C1orf210Q8IVY1 113 aa16.37■□□□□ 0.21
RNF40-209ENST00000566703 NELL2Q99435 816 aa16.37■□□□□ 0.21
RNF40-209ENST00000566703 OXCT2Q9BYC2 517 aaPredicted RBP16.37■□□□□ 0.21
RNF40-209ENST00000566703 FBXL5Q9UKA1 691 aa16.37■□□□□ 0.21
RNF40-209ENST00000566703 ODF2LQ9ULJ1 636 aa16.37■□□□□ 0.21
RNF40-209ENST00000566703 VWA8A3KMH1 1905 aa16.37■□□□□ 0.21
RNF40-209ENST00000566703 WDR27A2RRH5 827 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 VWA3AA6NCI4 1184 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 MEFVO15553 781 aaPredicted RBP16.36■□□□□ 0.21
RNF40-209ENST00000566703 HARSP12081 509 aaKnown RBP16.36■□□□□ 0.21
RNF40-209ENST00000566703 CYP3A5P20815 502 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 MARCKSP29966 332 aaPredicted RBP16.36■□□□□ 0.21
RNF40-209ENST00000566703 LRPAP1P30533 357 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 MAGEA9P43362 315 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 NCKAP1LP55160 1127 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 SNW1Q13573 536 aaKnown RBP16.36■□□□□ 0.21
RNF40-209ENST00000566703 MLF2Q15773 248 aaPredicted RBP16.36■□□□□ 0.21
RNF40-209ENST00000566703 ZBTB6Q15916 424 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 CTXN3Q4LDR2 81 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 TMEM119Q4V9L6 283 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 ZNF280DQ6N043 979 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 ADSSL1Q8N142 457 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 ST13P5Q8NFI4 369 aaPredicted RBP16.36■□□□□ 0.21
RNF40-209ENST00000566703 DDX12PQ92771 950 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 C18orf25Q96B23 403 aaPredicted RBP16.36■□□□□ 0.21
RNF40-209ENST00000566703 MCRS1Q96EZ8 462 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 CYP4F11Q9HBI6 524 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 AFF4Q9UHB7 1163 aaKnown RBP16.36■□□□□ 0.21
RNF40-209ENST00000566703 PCDHB8Q9UN66 801 aa16.36■□□□□ 0.21
RNF40-209ENST00000566703 TTC26A0AVF1 554 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 BMP15O95972 392 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 LMNAP02545 664 aaKnown RBP16.35■□□□□ 0.21
RNF40-209ENST00000566703 PAX3P23760 479 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 GJB2P29033 226 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 ABCD1P33897 745 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 MCM4P33991 863 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 FOXK2Q01167 660 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 RAD51AP2Q09MP3 1159 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 ARSHQ5FYA8 562 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 SPECC1Q5M775 1068 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 ZC3H14Q6PJT7 736 aaKnown RBP16.35■□□□□ 0.21
RNF40-209ENST00000566703 HAUS6Q7Z4H7 955 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 ELMOD1Q8N336 334 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 LEMD2Q8NC56 503 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 ELSPBP1Q96BH3 223 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 TBC1D32Q96NH3 1257 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 PLIN2Q99541 437 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms