RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 GTF2H1P32780 548 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 YARSP54577 528 aaKnown RBP11.99□□□□□ -0.49
SF3B3-205ENST00000564899 PPP3CAQ08209 521 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 CETN1Q12798 172 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 EXOC3L4Q17RC7 722 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 CBWD6Q4V339 395 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 CBWD3Q5JTY5 395 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 CBWD5Q5RIA9 395 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 LMBRD2Q68DH5 695 aaPredicted RBP11.99□□□□□ -0.49
SF3B3-205ENST00000564899 RPUSD2Q8IZ73 545 aaKnown RBP11.99□□□□□ -0.49
SF3B3-205ENST00000564899 CRACR2AQ9BSW2 395 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 APOL6Q9BWW8 343 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 LSM14BQ9BX40 385 aaKnown RBP11.99□□□□□ -0.49
SF3B3-205ENST00000564899 IFIH1Q9BYX4 1025 aaKnown RBP11.99□□□□□ -0.49
SF3B3-205ENST00000564899 TMX1Q9H3N1 280 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 NXF3Q9H4D5 531 aaKnown RBP11.99□□□□□ -0.49
SF3B3-205ENST00000564899 TMEM8AQ9HCN3 771 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 MTUS1Q9ULD2 1270 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 COG5Q9UP83 839 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 SIK3Q9Y2K2 1263 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 IPPQ9Y573 584 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 PTPRJQ12913 1337 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 P4HA2O15460 535 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 MGEA5O60502 916 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 NBNO60934 754 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 KLK7P49862 253 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 RAB27AP51159 221 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 CLDN10P78369 228 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 DEFB103AP81534 67 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 KCNMA1Q12791 1236 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 TRIM14Q14142 442 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 DSC3Q14574 896 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 SLC10A6Q3KNW5 377 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 KRT39Q6A163 491 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 GBP6Q6ZN66 633 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 PPFIBP1Q86W92 1011 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 WDR49Q8IV35 697 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 HACE1Q8IYU2 909 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 TMEM117Q9H0C3 514 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 ASB7Q9H672 318 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 FAM105AQ9NUU6 356 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 GCNT4Q9P109 453 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 IMPACTQ9P2X3 320 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 HES2Q9Y543 173 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 PCDHB2Q9Y5E7 798 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.98□□□□□ -0.49
SF3B3-205ENST00000564899 MYO15AQ9UKN7 3530 aa11.98□□□□□ -0.49
SF3B3-205ENST00000564899 ZNF318Q5VUA4 2279 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 TTC26A0AVF1 554 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 LACTBL1A8MY62 500 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 PMM2O15305 246 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 MEFVO15553 781 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-205ENST00000564899 RECQL4O94761 1208 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 PARNO95453 639 aaKnown RBP11.97□□□□□ -0.49
SF3B3-205ENST00000564899 TPM1P09493 284 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 TMEM191BP0C7N4 346 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 IL9P15248 144 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 TRIM21P19474 475 aaKnown RBP11.97□□□□□ -0.49
SF3B3-205ENST00000564899 AKAP5P24588 427 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 AP3M2P53677 418 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 TFAMQ00059 246 aaKnown RBP11.97□□□□□ -0.49
SF3B3-205ENST00000564899 BIRC3Q13489 604 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 SV2AQ7L0J3 742 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 CD302Q8IX05 232 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 EFCAB13Q8IY85 973 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 SMG8Q8ND04 991 aaKnown RBP11.97□□□□□ -0.49
SF3B3-205ENST00000564899 NEK11Q8NG66 645 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 ZNF516Q92618 1163 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 FAM84AQ96KN4 292 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 SNX27Q96L92 541 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 SLC9A7Q96T83 725 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 ADAM2Q99965 735 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 NUP58Q9BVL2 599 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 FTHL17Q9BXU8 183 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 MTMR12Q9C0I1 747 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 INTS2Q9H0H0 1204 aaKnown RBP11.97□□□□□ -0.49
SF3B3-205ENST00000564899 PLEKHA5Q9HAU0 1116 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 FAM207AQ9NSI2 230 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-205ENST00000564899 PARP2Q9UGN5 583 aa11.97□□□□□ -0.49
SF3B3-205ENST00000564899 TNNC2P02585 160 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 C4BPAP04003 597 aaKnown RBP11.96□□□□□ -0.49
SF3B3-205ENST00000564899 NFICP08651 508 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 SKIP12755 728 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 ITGA4P13612 1032 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 SLC9A1P19634 815 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 IBSPP21815 317 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-205ENST00000564899 PON1P27169 355 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 GSDMDP57764 484 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 TBX2Q13207 712 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-205ENST00000564899 TMEM132DQ14C87 1099 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 DUOXA2Q1HG44 320 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 ZACNQ401N2 412 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 EPC2Q52LR7 807 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 PLEKHG4Q58EX7 1191 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 TDRD10Q5VZ19 366 aaKnown RBP11.96□□□□□ -0.49
SF3B3-205ENST00000564899 JADE1Q6IE81 842 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 C15orf39Q6ZRI6 1047 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 CCDC186Q7Z3E2 898 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 FBXL13Q8NEE6 735 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 DBF4BQ8NFT6 615 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms