RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PIK3CAP42336 1068 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 SYCP2LQ5T4T6 812 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ANKS1BQ7Z6G8 1248 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ANKRD35Q8N283 1001 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 PSPC1Q8WXF1 523 aaKnown RBP21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 FAM20AQ96MK3 541 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CCDC77Q9BR77 488 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 NOCTQ9UK39 431 aaKnown RBP21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CYP11B1P15538 503 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 RCN2Q14257 317 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 HHATQ5VTY9 493 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ZC3H18Q86VM9 953 aaKnown RBP21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 SCAF8Q9UPN6 1271 aaKnown RBP21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 C2CD2Q9Y426 696 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 USH1CQ9Y6N9 552 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 PLS3P13797 630 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 PCNX4Q63HM2 1172 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 LXNQ9BS40 222 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 TRAIPQ9BWF2 469 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 DCLK3Q9C098 648 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 KIAA1586Q9HCI6 787 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ZFP69BQ9UJL9 534 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 RPS6KA4O75676 772 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 KRT36O76013 467 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 HLA-DOAP06340 250 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 RCN1Q15293 331 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ZNF568Q3ZCX4 644 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CERKLQ49MI3 558 aaPredicted RBP21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 Q4G0T1 1027 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 PLEKHG4Q58EX7 1191 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CDC42EP5Q6NZY7 148 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 PPP1R21Q6ZMI0 780 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 SLF2Q8IX21 1173 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 SCYL3Q8IZE3 742 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 DAW1Q8N136 415 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 DMAC2Q9NW81 257 aa21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CPSF2Q9P2I0 782 aaKnown RBP21.77■■□□□ 1.08
MAP1LC3B-206ENST00000564844 EIF3DO15371 548 aaKnown RBP eCLIP21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 GGPS1O95749 300 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 NEFHP12036 1026 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ATF7P17544 494 aaPredicted RBP21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SREBF1P36956 1147 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 C1orf220Q5T0J3 134 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SYDE2Q5VT97 1194 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 DDTLA6NHG4 134 aaPredicted RBP21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SLC16A4O15374 487 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ALDH3A1P30838 453 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ICA1Q05084 483 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 EFTUD2Q15029 972 aaKnown RBP eCLIP21.76■■□□□ 1.073e-7■■■■□ 21.2
MAP1LC3B-206ENST00000564844 CLUL1Q15846 466 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 MDH1BQ5I0G3 518 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 PRR5LQ6MZQ0 368 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 LVRNQ6Q4G3 990 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 CRYGNQ8WXF5 182 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 MKNK1Q9BUB5 465 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 LRMDAQ9H2I8 198 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 FSCN2O14926 492 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ZBED4O75132 1171 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ASMTLO95671 621 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 NT5C2P49902 561 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 PAPOLAP51003 745 aaKnown RBP21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 OTOAQ7RTW8 1153 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 CCDC125Q86Z20 511 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 RFWD2Q8NHY2 731 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 MBOAT7Q96N66 472 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 POLR3CQ9BUI4 534 aaPredicted RBP21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 FBXO6Q9NRD1 293 aaPredicted RBP21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 NMRK1Q9NWW6 199 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 HSPBP1Q9NZL4 362 aa21.76■■□□□ 1.07
MAP1LC3B-206ENST00000564844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ADRB2P07550 413 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 PLCB3Q01970 1234 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 AP3B2Q13367 1082 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 NLRP9Q7RTR0 991 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ZBED8Q8IZ13 594 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 C7orf43Q8WVR3 580 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 POMGNT1Q8WZA1 660 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 MIPEPQ99797 713 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 LRRC42Q9Y546 428 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 GAD2Q05329 585 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 KLC1Q07866 573 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SPARCL1Q14515 664 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 PPP1R15BQ5SWA1 713 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 TAS1R2Q8TE23 839 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SMC6Q96SB8 1091 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 UNC45AQ9H3U1 944 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ZNF148Q9UQR1 794 aa21.75■■□□□ 1.07
MAP1LC3B-206ENST00000564844 NDUFB10O96000 172 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 CFHP08603 1231 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 UBTFL6P0CB48 400 aaPredicted RBP21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ADRA1DP25100 572 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 KPNB1Q14974 876 aaKnown RBP21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SEPT7Q16181 437 aaKnown RBP21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ATL2Q8NHH9 583 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ATAD5Q96QE3 1844 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SORBS3O60504 671 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ZCCHC18P0CG32 403 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 KRT4P19013 534 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 C11orf91Q3C1V1 193 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 PADI6Q6TGC4 694 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms