RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 ALCAMQ13740 583 aa30.8■■■□□ 2.52
NME3-203ENST00000563367 ZBTB6Q15916 424 aa30.8■■■□□ 2.52
NME3-203ENST00000563367 TPRNQ4KMQ1 711 aa30.8■■■□□ 2.52
NME3-203ENST00000563367 GRAMD1CQ8IYS0 662 aa30.8■■■□□ 2.52
NME3-203ENST00000563367 KIF12Q96FN5 646 aa30.8■■■□□ 2.52
NME3-203ENST00000563367 SCAND2PQ9GZW5 306 aaPredicted RBP30.8■■■□□ 2.52
NME3-203ENST00000563367 GDPD2Q9HCC8 539 aa30.8■■■□□ 2.52
NME3-203ENST00000563367 DZANK1Q9NVP4 752 aa30.8■■■□□ 2.52
NME3-203ENST00000563367 FNIP2Q9P278 1114 aa30.8■■■□□ 2.52
NME3-203ENST00000563367 AGO2Q9UKV8 859 aaKnown RBP30.8■■■□□ 2.52
NME3-203ENST00000563367 ACTN4O43707 911 aaKnown RBP30.79■■■□□ 2.52
NME3-203ENST00000563367 FGFR3P22607 806 aa30.79■■■□□ 2.52
NME3-203ENST00000563367 RPL9P32969 192 aaKnown RBP30.79■■■□□ 2.52
NME3-203ENST00000563367 RARS2Q5T160 578 aaKnown RBP30.79■■■□□ 2.52
NME3-203ENST00000563367 GLYCTKQ8IVS8 523 aa30.79■■■□□ 2.52
NME3-203ENST00000563367 LNX1Q8TBB1 728 aaPredicted RBP30.79■■■□□ 2.52
NME3-203ENST00000563367 PIK3R5Q8WYR1 880 aa30.79■■■□□ 2.52
NME3-203ENST00000563367 POMGNT1Q8WZA1 660 aa30.79■■■□□ 2.52
NME3-203ENST00000563367 PYM1Q9BRP8 204 aaKnown RBP30.79■■■□□ 2.52
NME3-203ENST00000563367 ADAM7Q9H2U9 754 aa30.79■■■□□ 2.52
NME3-203ENST00000563367 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP30.79■■■□□ 2.52
NME3-203ENST00000563367 HPSEQ9Y251 543 aa30.79■■■□□ 2.52
NME3-203ENST00000563367 SLFN14P0C7P3 912 aa30.78■■■□□ 2.52
NME3-203ENST00000563367 SSTR3P32745 418 aaPredicted RBP30.78■■■□□ 2.52
NME3-203ENST00000563367 CUL4BQ13620 913 aa30.78■■■□□ 2.52
NME3-203ENST00000563367 CRELD2Q6UXH1 353 aaPredicted RBP30.78■■■□□ 2.52
NME3-203ENST00000563367 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.78■■■□□ 2.52
NME3-203ENST00000563367 PALB2Q86YC2 1186 aa30.78■■■□□ 2.52
NME3-203ENST00000563367 KHSRPQ92945 711 aaKnown RBP eCLIP30.78■■■□□ 2.52
NME3-203ENST00000563367 FAM212AQ96EL1 285 aa30.78■■■□□ 2.52
NME3-203ENST00000563367 WEE2P0C1S8 567 aa30.77■■■□□ 2.52
NME3-203ENST00000563367 EHHADHQ08426 723 aa30.77■■■□□ 2.52
NME3-203ENST00000563367 CBX2Q14781 532 aaPredicted RBP30.77■■■□□ 2.52
NME3-203ENST00000563367 PSMD5Q16401 504 aa30.77■■■□□ 2.52
NME3-203ENST00000563367 UNC13DQ70J99 1090 aa30.77■■■□□ 2.52
NME3-203ENST00000563367 CEP57L1Q8IYX8 460 aa30.77■■■□□ 2.52
NME3-203ENST00000563367 SYCP3Q8IZU3 236 aa30.77■■■□□ 2.52
NME3-203ENST00000563367 ZSWIM2Q8NEG5 633 aa30.77■■■□□ 2.52
NME3-203ENST00000563367 CLSTN3Q9BQT9 956 aa30.77■■■□□ 2.52
NME3-203ENST00000563367 GLUD1P00367 558 aa30.76■■■□□ 2.51
NME3-203ENST00000563367 SPATA31D3P0C874 917 aa30.76■■■□□ 2.51
NME3-203ENST00000563367 TKTP29401 623 aaKnown RBP30.76■■■□□ 2.51
NME3-203ENST00000563367 HOXD13P35453 343 aa30.76■■■□□ 2.51
NME3-203ENST00000563367 GUCY2FP51841 1108 aa30.76■■■□□ 2.51
NME3-203ENST00000563367 NUCB2P80303 420 aa30.76■■■□□ 2.51
NME3-203ENST00000563367 CREMQ03060 361 aa30.76■■■□□ 2.51
NME3-203ENST00000563367 ITIH3Q06033 890 aa30.76■■■□□ 2.51
NME3-203ENST00000563367 POSTNQ15063 836 aa30.76■■■□□ 2.51
NME3-203ENST00000563367 JADE1Q6IE81 842 aa30.76■■■□□ 2.51
NME3-203ENST00000563367 SPATA31D4Q6ZUB0 917 aa30.76■■■□□ 2.51
NME3-203ENST00000563367 MAN1C1Q9NR34 630 aa30.76■■■□□ 2.51
NME3-203ENST00000563367 UBQLN1Q9UMX0 589 aaKnown RBP30.76■■■□□ 2.51
NME3-203ENST00000563367 ADAM12O43184 909 aa30.75■■■□□ 2.51
NME3-203ENST00000563367 TRAPPC3O43617 180 aa30.75■■■□□ 2.51
NME3-203ENST00000563367 FAM26FQ5R3K3 315 aa30.75■■■□□ 2.51
NME3-203ENST00000563367 CES5AQ6NT32 575 aa30.75■■■□□ 2.51
NME3-203ENST00000563367 LILRA6Q6PI73 481 aa30.75■■■□□ 2.51
NME3-203ENST00000563367 TMC5Q6UXY8 1006 aa30.75■■■□□ 2.51
NME3-203ENST00000563367 EPM2AIP1Q7L775 607 aaPredicted RBP30.75■■■□□ 2.51
NME3-203ENST00000563367 PAGE5Q96GU1 130 aa30.75■■■□□ 2.51
NME3-203ENST00000563367 PHF7Q9BWX1 381 aaPredicted RBP30.75■■■□□ 2.51
NME3-203ENST00000563367 TMEM206Q9H813 350 aa30.75■■■□□ 2.51
NME3-203ENST00000563367 SCN1AP35498 2009 aa30.74■■■□□ 2.51
NME3-203ENST00000563367 FAM237AA0A1B0GTK4 181 aa30.74■■■□□ 2.51
NME3-203ENST00000563367 TGM5O43548 720 aa30.74■■■□□ 2.51
NME3-203ENST00000563367 NFICP08651 508 aa30.74■■■□□ 2.51
NME3-203ENST00000563367 CYP3A5P20815 502 aa30.74■■■□□ 2.51
NME3-203ENST00000563367 LRPAP1P30533 357 aa30.74■■■□□ 2.51
NME3-203ENST00000563367 NDUFA8P51970 172 aa30.74■■■□□ 2.51
NME3-203ENST00000563367 CD302Q8IX05 232 aa30.74■■■□□ 2.51
NME3-203ENST00000563367 SAAL1Q96ER3 474 aa30.74■■■□□ 2.51
NME3-203ENST00000563367 TSPAN18Q96SJ8 248 aa30.74■■■□□ 2.51
NME3-203ENST00000563367 CBWD1Q9BRT8 395 aa30.74■■■□□ 2.51
NME3-203ENST00000563367 SFXN1Q9H9B4 322 aa30.74■■■□□ 2.51
NME3-203ENST00000563367 NUB1Q9Y5A7 615 aa30.74■■■□□ 2.51
NME3-203ENST00000563367 GARTP22102 1010 aa30.73■■■□□ 2.51
NME3-203ENST00000563367 SPATA1Q5VX52 437 aa30.73■■■□□ 2.51
NME3-203ENST00000563367 STXBP4Q6ZWJ1 553 aa30.73■■■□□ 2.51
NME3-203ENST00000563367 POP1Q99575 1024 aaKnown RBP30.73■■■□□ 2.51
NME3-203ENST00000563367 FAM213AQ9BRX8 229 aa30.73■■■□□ 2.51
NME3-203ENST00000563367 DENND4AQ7Z401 1863 aa30.73■■■□□ 2.51
NME3-203ENST00000563367 PVALEFA0A1B0GWK0 134 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 A0A1W2PQ27 194 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 A0A1W2PQ64 194 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 A0A1W2PQD8 194 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 LOC730098B7Z3J9 87 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 SYKP43405 635 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 PDXDC1Q6P996 788 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 RSPO2Q6UXX9 243 aaPredicted RBP30.72■■■□□ 2.51
NME3-203ENST00000563367 FSIP1Q8NA03 581 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 ZNF507Q8TCN5 953 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 GOLPH3LQ9H4A5 285 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 PCIF1Q9H4Z3 704 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 POMKQ9H5K3 350 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 MTRRQ9UBK8 725 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 USP25Q9UHP3 1055 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 DOCK6Q96HP0 2047 aa30.72■■■□□ 2.51
NME3-203ENST00000563367 SPDYE4A6NLX3 237 aa30.71■■■□□ 2.51
NME3-203ENST00000563367 EIF3DO15371 548 aaKnown RBP eCLIP30.71■■■□□ 2.51
NME3-203ENST00000563367 KLRC4O43908 158 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms