RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 KDM7AQ6ZMT4 941 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 IKBIPQ70UQ0 350 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 MMAAQ8IVH4 418 aaKnown RBP9.93□□□□□ -0.82
CDH1-205ENST00000562836 DYDC2Q96IM9 177 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 SYNDIG1Q9H7V2 258 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 INTS9Q9NV88 658 aaKnown RBP9.93□□□□□ -0.82
CDH1-205ENST00000562836 ARMC1Q9NVT9 282 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 PNMA3Q9UL41 463 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 SLC12A4Q9UP95 1085 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 LRCH1Q9Y2L9 728 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 MAST1Q9Y2H9 1570 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 CTAGE15A4D2H0 777 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 GMNCA6NCL1 334 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 BTBD19C9JJ37 291 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 CCRL2O00421 344 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 CTAGE8P0CG41 777 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 CCNA1P78396 465 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 SNTA1Q13424 505 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 SPATS1Q496A3 300 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 CTAGE6Q86UF2 777 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 UNC45BQ8IWX7 931 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 CTAGE4Q8IX94 777 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 TTC13Q8NBP0 860 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 C7orf25Q9BPX7 421 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 TIMMDC1Q9NPL8 285 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 SNRKQ9NRH2 765 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 PGAP2Q9UHJ9 254 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 PTBP2Q9UKA9 531 aaKnown RBP9.93□□□□□ -0.82
CDH1-205ENST00000562836 PPP2R2CQ9Y2T4 447 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 NSD2O96028 1365 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 ATP10BO94823 1461 aa9.93□□□□□ -0.82
CDH1-205ENST00000562836 SH3PXD2BA1X283 911 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 KPNA5O15131 536 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 GPC4O75487 556 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 TIPRLO75663 272 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 IDH1O75874 414 aaKnown RBP9.92□□□□□ -0.82
CDH1-205ENST00000562836 MAPKAPK2P49137 400 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 GCNT1Q02742 428 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 NNTQ13423 1086 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 DHX34Q14147 1143 aaKnown RBP9.92□□□□□ -0.82
CDH1-205ENST00000562836 ZC3H18Q86VM9 953 aaKnown RBP9.92□□□□□ -0.82
CDH1-205ENST00000562836 DGKHQ86XP1 1220 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 NUP93Q8N1F7 819 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 GATA6Q92908 595 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 MAP6Q96JE9 813 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 C9orf16Q9BUW7 83 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 ZBTB40Q9NUA8 1239 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 CYB5R1Q9UHQ9 305 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 GRID1Q9ULK0 1009 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 YEATS2Q9ULM3 1422 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 ZSCAN5CA6NGD5 496 aaPredicted RBP9.92□□□□□ -0.82
CDH1-205ENST00000562836 HNRNPCL2B2RXH8 293 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 B4E1Z4 1266 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 RANBP6O60518 1105 aaKnown RBP9.92□□□□□ -0.82
CDH1-205ENST00000562836 HNRNPCL1O60812 293 aaKnown RBP9.92□□□□□ -0.82
CDH1-205ENST00000562836 DKC1O60832 514 aaKnown RBP eCLIP9.92□□□□□ -0.82
CDH1-205ENST00000562836 CFBP00751 764 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 URODP06132 367 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 GSTA1P08263 222 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 KRT16P08779 473 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 GFAPP14136 432 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 RXRAP19793 462 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 ASMTP46597 345 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 KRT6CP48668 564 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 HNRNPMP52272 730 aaKnown RBP eCLIP9.92□□□□□ -0.82
CDH1-205ENST00000562836 SSTP61278 116 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 RPP30P78346 268 aaKnown RBP9.92□□□□□ -0.82
CDH1-205ENST00000562836 MRPS25P82663 173 aaKnown RBP9.92□□□□□ -0.82
CDH1-205ENST00000562836 RASGRF1Q13972 1273 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 ALFQ53S48 1182 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 RTP2Q5QGT7 225 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 FAM124AQ86V42 546 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 PLEKHO2Q8TD55 490 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 KCTD4Q8WVF5 259 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 LPPQ93052 612 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 SENP6Q9GZR1 1112 aaPredicted RBP9.92□□□□□ -0.82
CDH1-205ENST00000562836 ATP13A1Q9HD20 1204 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 LARSQ9P2J5 1176 aaKnown RBP9.92□□□□□ -0.82
CDH1-205ENST00000562836 ERVK-11Q9UQG0 969 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 SNCAIPQ9Y6H5 919 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 STON1Q9Y6Q2 735 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 NPHP3-ACAD11A0A0J9YXS1 232 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 FYB1O15117 783 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 PEX1O43933 1283 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 SSX5O60225 188 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 DBTP11182 482 aaKnown RBP9.92□□□□□ -0.82
CDH1-205ENST00000562836 CPB1P15086 417 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 CCNA2P20248 432 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 CHRNEQ04844 493 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 STK4Q13043 487 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 EDRF1Q3B7T1 1238 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 FAM205BPQ63HN1 556 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 KSR2Q6VAB6 950 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 RNF19BQ6ZMZ0 732 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 TTC17Q96AE7 1141 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 CYP4F11Q9HBI6 524 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 KIAA1586Q9HCI6 787 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 INTS7Q9NVH2 962 aaKnown RBP9.92□□□□□ -0.82
CDH1-205ENST00000562836 PPP1R14DQ9NXH3 145 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 GIN1Q9NXP7 522 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms