RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 FOXD4L6Q3SYB3 417 aaPredicted RBP10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 ARSHQ5FYA8 562 aa10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 HERC4Q5GLZ8 1057 aaPredicted RBP10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 KANK3Q6NY19 840 aa10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 PRSS55Q6UWB4 352 aaPredicted RBP10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 FOXD4L3Q6VB84 417 aaPredicted RBP10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 CCDC73Q6ZRK6 1079 aa10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 OTOP3Q7RTS5 596 aa10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 DYMQ7RTS9 669 aa10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 CEP120Q8N960 986 aa10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 STAMQ92783 540 aa10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 CLIC6Q96NY7 704 aa10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 CCSER1Q9C0I3 900 aa10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 CHST7Q9NS84 486 aa10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 CDH22Q9UJ99 828 aa10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 TBX20Q9UMR3 447 aa10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 MTMR6Q9Y217 621 aa10.15□□□□□ -0.78
CHRFAM7A-204ENST00000562729 PODXLO00592 558 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 TGM5O43548 720 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 XPOTO43592 962 aaKnown RBP10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 LILRB3O75022 631 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 CLTAP09496 248 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 IDEP14735 1019 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 GBP2P32456 591 aaPredicted RBP10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 MCM4P33991 863 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 MTMR3Q13615 1198 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 PTPN21Q16825 1174 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 SEZ6Q53EL9 994 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 RTP2Q5QGT7 225 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 C15orf39Q6ZRI6 1047 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 TAS1R3Q7RTX0 852 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 GPR149Q86SP6 731 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 SUGP1Q8IWZ8 645 aaKnown RBP10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 KREMEN2Q8NCW0 462 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 SMG7Q92540 1137 aaKnown RBP10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 EDAQ92838 391 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 SNX21Q969T3 373 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 ZBTB45Q96K62 511 aaPredicted RBP10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 SNX27Q96L92 541 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 MFSD14AQ96MC6 490 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 PPP1R10Q96QC0 940 aaKnown RBP10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 USP28Q96RU2 1077 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 MSTO1Q9BUK6 570 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 PANK2Q9BZ23 570 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 PLEKHA4Q9H4M7 779 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 MRPL44Q9H9J2 332 aaKnown RBP10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 GOLGA2P5Q9HBQ8 144 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 RXFP1Q9HBX9 757 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 FNIP2Q9P278 1114 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 FBXO2Q9UK22 296 aaPredicted RBP10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 POLIQ9UNA4 740 aa10.14□□□□□ -0.79
CHRFAM7A-204ENST00000562729 C2CD4DB7Z1M9 353 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 SPTLC2O15270 562 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 CXCL8P10145 99 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 KCNE1P15382 129 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 RPL9P32969 192 aaKnown RBP10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 ARPP19P56211 112 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 ZXDAP98168 799 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 MCL1Q07820 350 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 LAPTM4AQ15012 233 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 SLC39A14Q15043 492 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 PTPAQ15257 358 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 UPP1Q16831 310 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 PPM1LQ5SGD2 360 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 SLFN12LQ6IEE8 588 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 CYP26C1Q6V0L0 522 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 TRIM67Q6ZTA4 783 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 ANKS3Q6ZW76 656 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 GPR65Q8IYL9 337 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 RNF168Q8IYW5 571 aaPredicted RBP10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 SYCP3Q8IZU3 236 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 PDILTQ8N807 584 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 NOC3LQ8WTT2 800 aaKnown RBP10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 HDAC7Q8WUI4 952 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 PIK3R5Q8WYR1 880 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 PBXIP1Q96AQ6 731 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 LRRC27Q9C0I9 530 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 CXCL16Q9H2A7 254 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 RPF1Q9H9Y2 349 aaKnown RBP10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 PTPRHQ9HD43 1115 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 BLOC1S4Q9NUP1 217 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 ZDHHC7Q9NXF8 308 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 CNTN3Q9P232 1028 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 TFIP11Q9UBB9 837 aaKnown RBP10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 RAPGEFL1Q9UHV5 662 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 EXOC7Q9UPT5 735 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 PLXNA3P51805 1871 aa10.13□□□□□ -0.79
CHRFAM7A-204ENST00000562729 TMEM221A6NGB7 291 aa10.12□□□□□ -0.79
CHRFAM7A-204ENST00000562729 H7C4K7 107 aa10.12□□□□□ -0.79
CHRFAM7A-204ENST00000562729 TMEM189-UBE2V1I3L0A0 370 aa10.12□□□□□ -0.79
CHRFAM7A-204ENST00000562729 I3L4J1 428 aa10.12□□□□□ -0.79
CHRFAM7A-204ENST00000562729 M0R296 226 aa10.12□□□□□ -0.79
CHRFAM7A-204ENST00000562729 XYLBO75191 536 aa10.12□□□□□ -0.79
CHRFAM7A-204ENST00000562729 RFPL2O75678 378 aa10.12□□□□□ -0.79
CHRFAM7A-204ENST00000562729 GCNT3O95395 438 aa10.12□□□□□ -0.79
CHRFAM7A-204ENST00000562729 BRD1O95696 1058 aa10.12□□□□□ -0.79
CHRFAM7A-204ENST00000562729 GAP43P17677 238 aa10.12□□□□□ -0.79
CHRFAM7A-204ENST00000562729 PROZP22891 400 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms