RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 COL4A3BPQ9Y5P4 624 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 FNDC1Q4ZHG4 1894 aaPredicted RBP6.44□□□□□ -1.38
CDH13-206ENST00000562601 MYH11P35749 1972 aa6.44□□□□□ -1.38
CDH13-206ENST00000562601 LINC01553A4QN01 128 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 ARHGEF35A5YM69 484 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 C9orf172C9J069 976 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 LAD1O00515 517 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 MSTNO14793 375 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 GPR182O15218 404 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 SSBP05455 408 aaKnown RBP eCLIP6.43□□□□□ -1.38
CDH13-206ENST00000562601 DARSP14868 501 aaKnown RBP6.43□□□□□ -1.38
CDH13-206ENST00000562601 PRPHP41219 470 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 RAD51AP2Q09MP3 1159 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 PKP1Q13835 747 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 CCDC85BQ15834 202 aaPredicted RBP6.43□□□□□ -1.38
CDH13-206ENST00000562601 KRT79Q5XKE5 535 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 KCNK18Q7Z418 384 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 IL22RA1Q8N6P7 574 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 USP38Q8NB14 1042 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 RNF149Q8NC42 400 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 RNF169Q8NCN4 708 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 PSPC1Q8WXF1 523 aaKnown RBP6.43□□□□□ -1.38
CDH13-206ENST00000562601 PPM1EQ8WY54 764 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 CLIC6Q96NY7 704 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 YME1L1Q96TA2 773 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 JPH2Q9BR39 696 aaPredicted RBP6.43□□□□□ -1.38
CDH13-206ENST00000562601 C17orf80Q9BSJ5 609 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 RAB34Q9BZG1 259 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 POLR3FQ9H1D9 316 aaPredicted RBP6.43□□□□□ -1.38
CDH13-206ENST00000562601 BHMT2Q9H2M3 363 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 MINDY3Q9H8M7 445 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 IFT122Q9HBG6 1241 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 DBR1Q9UK59 544 aaKnown RBP6.43□□□□□ -1.38
CDH13-206ENST00000562601 TRIM33Q9UPN9 1127 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 INSL6Q9Y581 213 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 SQORQ9Y6N5 450 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 PRUNE2Q8WUY3 3088 aa6.43□□□□□ -1.38
CDH13-206ENST00000562601 COL4A4P53420 1690 aaPredicted RBP6.42□□□□□ -1.38
CDH13-206ENST00000562601 NPHP3-ACAD11A0A0J9YXS1 232 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 FAM229AH3BQW9 127 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 EREGO14944 169 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 CSPG5O95196 566 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 ZSCAN22P10073 491 aaPredicted RBP6.42□□□□□ -1.38
CDH13-206ENST00000562601 FGFR1P11362 822 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 XRCC6P12956 609 aaKnown RBP eCLIP6.42□□□□□ -1.38
CDH13-206ENST00000562601 FOSL2P15408 326 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 ZSCAN20P17040 1043 aaPredicted RBP6.42□□□□□ -1.38
CDH13-206ENST00000562601 LIG1P18858 919 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 GLRA2P23416 452 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 ARL2P36404 184 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 SARSP49591 514 aaKnown RBP6.42□□□□□ -1.38
CDH13-206ENST00000562601 HTRA4P83105 476 aaPredicted RBP6.42□□□□□ -1.38
CDH13-206ENST00000562601 NRG1Q02297 640 aaPredicted RBP6.42□□□□□ -1.38
CDH13-206ENST00000562601 GRB10Q13322 594 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 CAPSQ13938 189 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 ADGRE1Q14246 886 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 DHX8Q14562 1220 aaKnown RBP6.42□□□□□ -1.38
CDH13-206ENST00000562601 DSC3Q14574 896 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 KARSQ15046 597 aaKnown RBP6.42□□□□□ -1.38
CDH13-206ENST00000562601 PTPAQ15257 358 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 HAUS3Q68CZ6 603 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 USP49Q70CQ1 688 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 CATSPER4Q7RTX7 472 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 CABP7Q86V35 215 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 EXOC8Q8IYI6 725 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 LRRC15Q8TF66 581 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 GDPD5Q8WTR4 605 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 TCP11Q8WWU5 503 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 BSNDQ8WZ55 320 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 LPPQ93052 612 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 CPB2Q96IY4 423 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 EPSTI1Q96J88 318 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 CDK5RAP3Q96JB5 506 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 CHAMP1Q96JM3 812 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 USP28Q96RU2 1077 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 FTHL17Q9BXU8 183 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 PANK2Q9BZ23 570 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 CSRNP2Q9H175 543 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 RGS18Q9NS28 235 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 DNM3Q9UQ16 869 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 PIN4Q9Y237 131 aaKnown RBP6.42□□□□□ -1.38
CDH13-206ENST00000562601 PPME1Q9Y570 386 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 PCDHB7Q9Y5E2 793 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 COL4A6Q14031 1691 aa6.42□□□□□ -1.38
CDH13-206ENST00000562601 RALGAPA2Q2PPJ7 1873 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 TCHHQ07283 1943 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 TMEM265A0A087WTH1 108 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 LRRIQ4A6NIV6 560 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 TBKBP1A7MCY6 615 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 C1QTNF9BB2RNN3 333 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 C9IYK1 514 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 INO80B-WBP1J3KQ70 363 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 PDE2AO00408 941 aaPredicted RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 ASAP2O43150 1006 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 B4GALT5O43286 388 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 CPNE3O75131 537 aaKnown RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 HIP1RO75146 1068 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 DGKIO75912 1065 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 EYA4O95677 639 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 F13A1P00488 732 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms