RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 GPAT2Q6NUI2 795 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 BORAQ6PGQ7 559 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 CATSPERGQ6ZRH7 1159 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 MFSD6Q6ZSS7 791 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 KCTD1Q719H9 257 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 CATSPER4Q7RTX7 472 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 R3HCC1LQ7Z5L2 792 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 DNAJB7Q7Z6W7 309 aaPredicted RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 SESTD1Q86VW0 696 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 OR8H3Q8N146 312 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 SRBD1Q8N5C6 995 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 AOPEPQ8N6M6 819 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 TEX9Q8N6V9 391 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 AVL9Q8NBF6 648 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 PCSK9Q8NBP7 692 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 SPC24Q8NBT2 197 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 SMG8Q8ND04 991 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 ANKRD20A12PQ8NF67 263 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 OR6Y1Q8NGX8 325 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ZNF417Q8TAU3 575 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 PIWIL2Q8TC59 973 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 TSPEARQ8WU66 669 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 BCL7CQ8WUZ0 217 aaPredicted RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 GAB3Q8WWW8 586 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 THAP4Q8WY91 577 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 DLG3Q92796 817 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 N4BP2L2Q92802 583 aaPredicted RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 TNPO1Q92973 898 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 ZNF622Q969S3 477 aaKnown RBP eCLIP2.26□□□□□ -2.056e-7■□□□□ 8.1
RTF1-207ENST00000561076 VWCEQ96DN2 955 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 KIF1BPQ96EK5 621 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 RNF125Q96EQ8 232 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 MSLNLQ96KJ4 702 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 C16orf92Q96LL3 132 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 TRAPPC9Q96Q05 1148 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 PPP1R9BQ96SB3 815 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ZNF587Q96SQ5 575 aaPredicted RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 NELL2Q99435 816 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 VRK1Q99986 396 aaPredicted RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 NCAPGQ9BPX3 1015 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 DDX23Q9BUQ8 820 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 MXD3Q9BW11 206 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 TMPRSS13Q9BYE2 586 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ARHGAP39Q9C0H5 1083 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 AP5M1Q9H0R1 490 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ACAD9Q9H845 621 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 CHODLQ9H9P2 273 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 SUGCTQ9HAC7 445 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 SLC6A20Q9NP91 592 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 HEYLQ9NQ87 328 aaPredicted RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 SLC35C2Q9NQQ7 365 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 NECTIN3Q9NQS3 549 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ARHGEF3Q9NR81 526 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ATP8A2Q9NTI2 1148 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 GJB4Q9NTQ9 266 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 AP5S1Q9NUS5 200 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 USP40Q9NVE5 1235 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 GALNT8Q9NY28 637 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 GULP1Q9UBP9 304 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 GIMAP2Q9UG22 337 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ZC3H7BQ9UGR2 993 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 SRP68Q9UHB9 627 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 ANAPC5Q9UJX4 755 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 FEM1BQ9UK73 627 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 GTF3C4Q9UKN8 822 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 TCFL5Q9UL49 500 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 PCDHGB4Q9UN71 923 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 KNSTRNQ9Y448 316 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ZNF711Q9Y462 761 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 PCDHB6Q9Y5E3 794 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ACTL7BQ9Y614 415 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.26□□□□□ -2.05
RTF1-207ENST00000561076 IRS2Q9Y4H2 1338 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 LRRC14BA6NHZ5 514 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 SOBPA7XYQ1 873 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 F8W8V4 182 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 MYO1FO00160 1098 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 TAF4O00268 1085 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 ELL2O00472 640 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 DLL1O00548 723 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 HGSO14964 777 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 SLC27A2O14975 620 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 FGF10O15520 208 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 SGTAO43765 313 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 PRAMEF4O60810 478 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 ADAM11O75078 769 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 PHF2O75151 1096 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 COQ9O75208 318 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 URI1O94763 535 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 TMEM63AO94886 807 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 ZNF205O95201 554 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 TGDSO95455 350 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 NDST3O95803 873 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 DLGAP3O95886 979 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 MT-ND5P03915 603 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 THBS1P07996 1170 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 MMEP08473 750 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 SPARCP09486 303 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 SRGAP2BP0DMP2 458 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 TNNT1P13805 278 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms