RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 EIF3DO15371 548 aaKnown RBP eCLIP17.51■□□□□ 0.39
TPM1-228ENST00000560975 MSH4O15457 936 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 TJP3O95049 919 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 POTEJP0CG39 1038 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 CYP3A7P24462 503 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 USH1GQ495M9 461 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 LVRNQ6Q4G3 990 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 GSTA5Q7RTV2 222 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 PPM1KQ8N3J5 372 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 WDR60Q8WVS4 1066 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 ZNF75CPQ92670 426 aaPredicted RBP17.51■□□□□ 0.39
TPM1-228ENST00000560975 MCUR1Q96AQ8 359 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 PRR11Q96HE9 360 aaPredicted RBP17.51■□□□□ 0.39
TPM1-228ENST00000560975 PLVAPQ9BX97 442 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 ANAPC7Q9UJX3 599 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 IRS2Q9Y4H2 1338 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 PIAS1O75925 651 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 PLS3P13797 630 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 GJC1P36383 396 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 SLC34A1Q06495 639 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 NFIXQ14938 502 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 FASTKD3Q14CZ7 662 aaKnown RBP17.5■□□□□ 0.39
TPM1-228ENST00000560975 ODR4Q5SWX8 454 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 CLEC4GQ6UXB4 293 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 VPS52Q8N1B4 723 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 ATL2Q8NHH9 583 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 GRK7Q8WTQ7 553 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 STMN2Q93045 179 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 LENG9Q96B70 501 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 SLAIN2Q9P270 581 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 G3BP2Q9UN86 482 aaKnown RBP17.5■□□□□ 0.39
TPM1-228ENST00000560975 ROBO1Q9Y6N7 1651 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 MEIS2O14770 477 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 GYG2O15488 501 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 ECE2O60344 883 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 PSMG1O95456 288 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 ZNF76P36508 570 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 PIK3CAP42336 1068 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 CAV1Q03135 178 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 MAPK6Q16659 721 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 C2CD6Q53TS8 623 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 SLC45A4Q5BKX6 768 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 FYB2Q5VWT5 728 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 ZNF720Q7Z2F6 126 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 PPFIBP2Q8ND30 876 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 VPS37BQ9H9H4 285 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 WASF2Q9Y6W5 498 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 MTA2O94776 668 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 MAPK4P31152 587 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 FMO1Q01740 532 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 CTC1Q2NKJ3 1217 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 P3H1Q32P28 736 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 PCNX4Q63HM2 1172 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 LLGL2Q6P1M3 1020 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 KBTBD2Q8IY47 623 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 ZSWIM2Q8NEG5 633 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 SH3TC2Q8TF17 1288 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 MAIP1Q8WWC4 291 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 DYDC2Q96IM9 177 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 TRAPPC9Q96Q05 1148 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 BTBD10Q9BSF8 475 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 TLE6Q9H808 572 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 DMAC2Q9NW81 257 aa17.5■□□□□ 0.39
TPM1-228ENST00000560975 NOCTQ9UK39 431 aaKnown RBP17.5■□□□□ 0.39
TPM1-228ENST00000560975 DOT1LQ8TEK3 1739 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 MROH7Q68CQ1 1323 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 GSC2O15499 205 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 SLC26A4O43511 780 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 CCDC22O60826 627 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 CYP1A2P05177 515 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 MUTP22033 750 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 GSTT1P30711 240 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 HOXA13P31271 388 aaPredicted RBP17.49■□□□□ 0.39
TPM1-228ENST00000560975 RBM5P52756 815 aaKnown RBP eCLIP17.49■□□□□ 0.39
TPM1-228ENST00000560975 OCRLQ01968 901 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 TCEAL1Q15170 157 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 RASIP1Q5U651 963 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 MBOAT7Q96N66 472 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 HEY2Q9UBP5 337 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 SRP68Q9UHB9 627 aaKnown RBP17.49■□□□□ 0.39
TPM1-228ENST00000560975 MAGEA13PA6NCF6 341 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 C2CD2LO14523 706 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 MAP3K7O43318 606 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 GSTA2P09210 222 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 RALAP11233 206 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 CETN2P41208 172 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 NEK3P51956 506 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 EPC2Q52LR7 807 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 SLC10A5Q5PT55 438 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 C1orf186Q6ZWK4 172 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 UBE2OQ9C0C9 1292 aaKnown RBP17.49■□□□□ 0.39
TPM1-228ENST00000560975 FBXO6Q9NRD1 293 aaPredicted RBP17.49■□□□□ 0.39
TPM1-228ENST00000560975 KANSL3Q9P2N6 904 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 LNPEPQ9UIQ6 1025 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 VAV3Q9UKW4 847 aa17.49■□□□□ 0.39
TPM1-228ENST00000560975 HAUS5O94927 633 aa17.48■□□□□ 0.39
TPM1-228ENST00000560975 BMP3P12645 472 aa17.48■□□□□ 0.39
TPM1-228ENST00000560975 ZBTB16Q05516 673 aa17.48■□□□□ 0.39
TPM1-228ENST00000560975 CETN1Q12798 172 aa17.48■□□□□ 0.39
TPM1-228ENST00000560975 THOC5Q13769 683 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms