RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 FAM71AQ8IYT1 594 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 CEP120Q8N960 986 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 ACRBPQ8NEB7 543 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 OR5B17Q8NGF7 314 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 TMEM40Q8WWA1 233 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 ZNF592Q92610 1267 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 SNX27Q96L92 541 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 TRAIPQ9BWF2 469 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 GPR88Q9GZN0 384 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 NIF3L1Q9GZT8 377 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 VRTNQ9H8Y1 702 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 CDHR5Q9HBB8 845 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 CNTN3Q9P232 1028 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 INTUQ9ULD6 942 aa12.73□□□□□ -0.37
AC087878.1-201ENST00000560709 PTPRJQ12913 1337 aa12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 LACTBL1A8MY62 500 aa12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 ZSCAN20P17040 1043 aaPredicted RBP12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 PDE6CP51160 858 aa12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 OSTNP61366 133 aa12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 ARID5AQ03989 594 aa12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 PTK2Q05397 1052 aa12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 SLC10A6Q3KNW5 377 aa12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 LMBRD2Q68DH5 695 aaPredicted RBP12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 GJB7Q6PEY0 223 aa12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 CDR2LQ86X02 465 aaPredicted RBP12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 EFCAB13Q8IY85 973 aa12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 BEST2Q8NFU1 509 aa12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 CALR3Q96L12 384 aaKnown RBP12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 AJAP1Q9UKB5 411 aaPredicted RBP12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 OGDHLQ9ULD0 1010 aa12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 UBQLN1Q9UMX0 589 aaKnown RBP12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 NOC2LQ9Y3T9 749 aaKnown RBP12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 PCDHA13Q9Y5I0 950 aa12.72□□□□□ -0.37
AC087878.1-201ENST00000560709 BTNL10A8MVZ5 291 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 FOXN3O00409 490 aaPredicted RBP12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 PJA2O43164 708 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 LRRN2O75325 713 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 CD4P01730 458 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 CHRNA1P02708 482 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 PLEKP08567 350 aaPredicted RBP12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 NFICP08651 508 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 ATF7P17544 494 aaPredicted RBP12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 CYP3A5P20815 502 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 FGFR4P22455 802 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 MAGEA1P43355 309 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 RBP5P82980 135 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 PAK2Q13177 524 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 BFSP2Q13515 415 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 TRIM71Q2Q1W2 868 aaKnown RBP12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 ZNF699Q32M78 642 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 XKR4Q5GH76 650 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 FBXO47Q5MNV8 452 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 CCDC122Q5T0U0 273 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 TWF2Q6IBS0 349 aaKnown RBP12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 JADE1Q6IE81 842 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 SYT10Q6XYQ8 523 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 ZNF571Q7Z3V5 609 aaPredicted RBP12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 CTU1Q7Z7A3 348 aaKnown RBP12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 SH3TC2Q8TF17 1288 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 KIF12Q96FN5 646 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 KREMEN1Q96MU8 473 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 UNC93B1Q9H1C4 597 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 CYP3A43Q9HB55 503 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 ERVK-5Q9HDB9 667 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 UBN1Q9NPG3 1134 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 LZTFL1Q9NQ48 299 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 DNAI1Q9UI46 699 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 ST3GAL5Q9UNP4 418 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 CNTN6Q9UQ52 1028 aa12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 REXO2Q9Y3B8 237 aaKnown RBP12.71□□□□□ -0.37
AC087878.1-201ENST00000560709 TLR3O15455 904 aaKnown RBP12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 RECQL4O94761 1208 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 CLSTN1O94985 981 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 PARNO95453 639 aaKnown RBP12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 KCNE1P15382 129 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 TNFAIP3P21580 790 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 PNPLA4P41247 253 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 GFPT1Q06210 699 aaPredicted RBP12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 MYO1EQ12965 1108 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 NAB2Q15742 525 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 IFI16Q16666 785 aaKnown RBP12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 ZNF667Q5HYK9 610 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 UBXN11Q5T124 520 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 ALKBH5Q6P6C2 394 aaKnown RBP12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 FBXO46Q6PJ61 603 aaPredicted RBP12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 ALKAL1Q6UXT8 129 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 TMEM192Q8IY95 271 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 RNF10Q8N5U6 811 aaKnown RBP12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 LRRC52Q8N7C0 313 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 C1orf127Q8N9H9 656 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 PPP1R13LQ8WUF5 828 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 ALS2CR12Q96Q35 445 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 AGPAT1Q99943 283 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 SYT11Q9BT88 431 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 EIF2AQ9BY44 585 aaKnown RBP12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 DNAI2Q9GZS0 605 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 RNF208Q9H0X6 261 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 SLC38A7Q9NVC3 462 aa12.7□□□□□ -0.38
AC087878.1-201ENST00000560709 SNTG2Q9NY99 539 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms