RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 NXF3Q9H4D5 531 aaKnown RBP7.82□□□□□ -1.16
HMBOX1-214ENST00000560357 C11orf49Q9H6J7 331 aa7.82□□□□□ -1.16
HMBOX1-214ENST00000560357 NLRC4Q9NPP4 1024 aa7.82□□□□□ -1.16
HMBOX1-214ENST00000560357 ABHD10Q9NUJ1 306 aa7.82□□□□□ -1.16
HMBOX1-214ENST00000560357 RAB20Q9NX57 234 aa7.82□□□□□ -1.16
HMBOX1-214ENST00000560357 APEX2Q9UBZ4 518 aa7.82□□□□□ -1.16
HMBOX1-214ENST00000560357 FBXL5Q9UKA1 691 aa7.82□□□□□ -1.16
HMBOX1-214ENST00000560357 AJAP1Q9UKB5 411 aaPredicted RBP7.82□□□□□ -1.16
HMBOX1-214ENST00000560357 LHX6Q9UPM6 363 aa7.82□□□□□ -1.16
HMBOX1-214ENST00000560357 DAAM1Q9Y4D1 1078 aa7.82□□□□□ -1.16
HMBOX1-214ENST00000560357 IPPQ9Y573 584 aa7.82□□□□□ -1.16
HMBOX1-214ENST00000560357 PCDHB2Q9Y5E7 798 aa7.82□□□□□ -1.16
HMBOX1-214ENST00000560357 FHOD1Q9Y613 1164 aa7.82□□□□□ -1.16
HMBOX1-214ENST00000560357 UMODL1Q5DID0 1318 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 RALGAPA2Q2PPJ7 1873 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 NBNO60934 754 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 ZNF623O75123 536 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 PHACTR2O75167 634 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 RECQL4O94761 1208 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 CST3P01034 146 aaPredicted RBP7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 TNNC2P02585 160 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 SKILP12757 684 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 RFX1P22670 979 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 AKAP5P24588 427 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 YARSP54577 528 aaKnown RBP7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 JAM2P57087 298 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 TFAMQ00059 246 aaKnown RBP7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 BIRC3Q13489 604 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 NCOA4Q13772 614 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 DSG2Q14126 1118 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 ZBTB6Q15916 424 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 LRRC26Q2I0M4 334 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 XKR4Q5GH76 650 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 E4F1Q66K89 784 aaPredicted RBP7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 PDXDC1Q6P996 788 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 WDR59Q6PJI9 974 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 RRAGAQ7L523 313 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 CACNA2D4Q7Z3S7 1137 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 NECAB2Q7Z6G3 386 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 RTN4RL1Q86UN2 441 aaPredicted RBP7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 NT5DC4Q86YG4 428 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 ARHGEF19Q8IW93 802 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 CCDC112Q8NEF3 446 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 CXorf38Q8TB03 319 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 HELQQ8TDG4 1101 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 SYN2Q92777 582 aaPredicted RBP7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 ELMO3Q96BJ8 720 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 ANKRD36BP1Q96IX9 119 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 ZMAT2Q96NC0 199 aaKnown RBP7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 TSPAN18Q96SJ8 248 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 BAG1Q99933 345 aaPredicted RBP7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 ADAM2Q99965 735 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 PI4K2AQ9BTU6 479 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 STK33Q9BYT3 514 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 IFIH1Q9BYX4 1025 aaKnown RBP7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 MTMR12Q9C0I1 747 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 HIPK3Q9H422 1215 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 FAM105AQ9NUU6 356 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 CNTN3Q9P232 1028 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 DNAJC12Q9UKB3 198 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 PLAGL2Q9UPG8 496 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 DERAQ9Y315 318 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 C2CD2Q9Y426 696 aa7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 PDCD11Q14690 1871 aaKnown RBP7.81□□□□□ -1.16
HMBOX1-214ENST00000560357 A0A0U1RQF3 1178 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 LRRC53A6NM62 1247 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 ZC3H11AO75152 810 aaKnown RBP eCLIP7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 ASS1P00966 412 aaKnown RBP7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 TMEM191BP0C7N4 346 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 ITGA4P13612 1032 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 KCNE1P15382 129 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 ATF7P17544 494 aaPredicted RBP7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 PIK3CAP42336 1068 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 RAB27AP51159 221 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 MYL6P60660 151 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 CDK17Q00537 523 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 DRAP1Q14919 205 aaPredicted RBP7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 TMEM132DQ14C87 1099 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 MEA1Q16626 185 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 TSR1Q2NL82 804 aaKnown RBP7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 PLEKHG4Q58EX7 1191 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 WDR44Q5JSH3 913 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 FAM43BQ6ZT52 329 aaPredicted RBP7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 UBE2Q1Q7Z7E8 422 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 TMEM130Q8N3G9 435 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 C1orf127Q8N9H9 656 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 TET1Q8NFU7 2136 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 LINC01599Q8WXQ3 324 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 TATDN2Q93075 761 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 KREMEN1Q96MU8 473 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 NT5C1BQ96P26 610 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 CHP1Q99653 195 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 APOL6Q9BWW8 343 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 GPR88Q9GZN0 384 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 NUCKS1Q9H1E3 243 aaKnown RBP7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 WNT8AQ9H1J5 351 aa7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 APOBEC3GQ9HC16 384 aaKnown RBP7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 UBE2TQ9NPD8 197 aaPredicted RBP7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.8□□□□□ -1.16
HMBOX1-214ENST00000560357 RGS18Q9NS28 235 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms