RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 NFRKBQ6P4R8 1299 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 SLC47A2Q86VL8 602 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 CEP112Q8N8E3 955 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 DDX1Q92499 740 aaKnown RBP13.94□□□□□ -0.18
SMAD3-207ENST00000558763 ALS2CR12Q96Q35 445 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 PCDHB18PQ96TA0 734 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 FDXACB1Q9BRP7 624 aaPredicted RBP13.94□□□□□ -0.18
SMAD3-207ENST00000558763 INO80BQ9C086 356 aaPredicted RBP13.94□□□□□ -0.18
SMAD3-207ENST00000558763 CDT1Q9H211 546 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 EPC1Q9H2F5 836 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 PHF24Q9UPV7 400 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 TNFSF13BQ9Y275 285 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 A0A0A6YYK5 440 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-207ENST00000558763 RRN3P2A6NIE6 340 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 ZNF185O15231 689 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 CYP26A1O43174 497 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 TREHO43280 583 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 NCK2O43639 380 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 CSDE1O75534 798 aaKnown RBP13.93□□□□□ -0.18
SMAD3-207ENST00000558763 CABYRO75952 493 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 H2AFZP0C0S5 128 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 H2AFXP16104 143 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-207ENST00000558763 MATR3P43243 847 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMAD3-207ENST00000558763 SPOPLQ6IQ16 392 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 FBXO38Q6PIJ6 1188 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 H2AFVQ71UI9 128 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 CDR2LQ86X02 465 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-207ENST00000558763 KIAA0319LQ8IZA0 1049 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 CRISPLD2Q9H0B8 497 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 GTF2IRD1Q9UHL9 959 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 UMODL1Q5DID0 1318 aa13.93□□□□□ -0.18
SMAD3-207ENST00000558763 PRLRP16471 622 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 ACO1P21399 889 aaKnown RBP13.92□□□□□ -0.18
SMAD3-207ENST00000558763 PHKA2P46019 1235 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 FMO1Q01740 532 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 HSP90AA2PQ14568 343 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-207ENST00000558763 ZNF568Q3ZCX4 644 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 GDF6Q6KF10 455 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-207ENST00000558763 CREG2Q8IUH2 290 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 WDR49Q8IV35 697 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 EFCAB13Q8IY85 973 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 TMEM192Q8IY95 271 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 COG1Q8WTW3 980 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 UBXN4Q92575 508 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 PPP1R16BQ96T49 567 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 MMS19Q96T76 1030 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 FAM49AQ9H0Q0 323 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-207ENST00000558763 PRMT7Q9NVM4 692 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-207ENST00000558763 CITO14578 2027 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 KIAA0100Q14667 2235 aaKnown RBP13.92□□□□□ -0.18
SMAD3-207ENST00000558763 TRIP11Q15643 1979 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 TMEM253P0C7T8 217 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 GNAT1P11488 350 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 CYP2C9P11712 490 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 CYP11B1P15538 503 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 PIK3CAP42336 1068 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 GJA8P48165 433 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 ADAM17P78536 824 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 RUFY4Q6ZNE9 571 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 ENOSF1Q7L5Y1 443 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 RPUSD2Q8IZ73 545 aaKnown RBP13.92□□□□□ -0.18
SMAD3-207ENST00000558763 NOA1Q8NC60 698 aaKnown RBP13.92□□□□□ -0.18
SMAD3-207ENST00000558763 TPCN2Q8NHX9 752 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 RABGGTAQ92696 567 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 GOLGA1Q92805 767 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 ARHGEF26Q96DR7 871 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 OSBPL9Q96SU4 736 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 TMEM106CQ9BVX2 250 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 ISCUQ9H1K1 167 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 PDZD7Q9H5P4 517 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 AKT3Q9Y243 479 aa13.92□□□□□ -0.18
SMAD3-207ENST00000558763 MBLAC1A4D2B0 266 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-207ENST00000558763 FTCDO95954 541 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 TNFAIP3P21580 790 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 HOXC8P31273 242 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 BIRC3Q13489 604 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 TEX35Q5T0J7 233 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 MEI1Q5TIA1 1274 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 ZNF572Q7Z3I7 529 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-207ENST00000558763 SLFN11Q7Z7L1 901 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 UBR7Q8N806 425 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 DIS3LQ8TF46 1054 aaKnown RBP13.91□□□□□ -0.18
SMAD3-207ENST00000558763 TCHPQ9BT92 498 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 MTMR12Q9C0I1 747 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 SENP6Q9GZR1 1112 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-207ENST00000558763 GOLPH3Q9H4A6 298 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 C1orf112Q9NSG2 853 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 NUB1Q9Y5A7 615 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 RALGAPA2Q2PPJ7 1873 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 TMCO5BA8MYB1 307 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 ASS1P00966 412 aaKnown RBP13.91□□□□□ -0.18
SMAD3-207ENST00000558763 CALCAP01258 141 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 MMEP08473 750 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 ARF4P18085 180 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-207ENST00000558763 TMOD1P28289 359 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 USP8P40818 1118 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 MNX1P50219 401 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-207ENST00000558763 NOP14P78316 857 aaKnown RBP13.91□□□□□ -0.18
SMAD3-207ENST00000558763 TMEM62Q0P6H9 643 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 SESTD1Q86VW0 696 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms