RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 ACSF2Q96CM8 615 aaPredicted RBP16.9■□□□□ 0.3
CSHL1-208ENST00000558609 DNAJC19Q96DA6 116 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 WDR6Q9NNW5 1121 aaKnown RBP16.9■□□□□ 0.3
CSHL1-208ENST00000558609 MTRRQ9UBK8 725 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 LIMD1Q9UGP4 676 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 FBXW11Q9UKB1 542 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.9■□□□□ 0.3
CSHL1-208ENST00000558609 BACE2Q9Y5Z0 518 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 MYMKA6NI61 221 aa16.89■□□□□ 0.29
CSHL1-208ENST00000558609 I3L4J1 428 aa16.89■□□□□ 0.29
CSHL1-208ENST00000558609 SPTLC2O15270 562 aa16.89■□□□□ 0.29
CSHL1-208ENST00000558609 ADAM12O43184 909 aa16.89■□□□□ 0.29
CSHL1-208ENST00000558609 PPP6R2O75170 966 aa16.89■□□□□ 0.29
CSHL1-208ENST00000558609 ADRB2P07550 413 aa16.89■□□□□ 0.29
CSHL1-208ENST00000558609 TKTP29401 623 aaKnown RBP16.89■□□□□ 0.29
CSHL1-208ENST00000558609 ZBTB6Q15916 424 aa16.89■□□□□ 0.29
CSHL1-208ENST00000558609 ZC2HC1CQ53FD0 456 aaPredicted RBP16.89■□□□□ 0.29
CSHL1-208ENST00000558609 SLC39A4Q6P5W5 647 aa16.89■□□□□ 0.29
CSHL1-208ENST00000558609 MFSD14AQ96MC6 490 aa16.89■□□□□ 0.29
CSHL1-208ENST00000558609 TSPAN18Q96SJ8 248 aa16.89■□□□□ 0.29
CSHL1-208ENST00000558609 PRKD2Q9BZL6 878 aa16.89■□□□□ 0.29
CSHL1-208ENST00000558609 TFIP11Q9UBB9 837 aaKnown RBP16.89■□□□□ 0.29
CSHL1-208ENST00000558609 SEL1LQ9UBV2 794 aa16.89■□□□□ 0.29
CSHL1-208ENST00000558609 SORCS3Q9UPU3 1222 aa16.89■□□□□ 0.29
CSHL1-208ENST00000558609 PDCD11Q14690 1871 aaKnown RBP16.88■□□□□ 0.29
CSHL1-208ENST00000558609 A0A087X0B3 334 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 LACTBL1A8MY62 500 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 SYN3O14994 580 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 YEATS4O95619 227 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 HSP90AA1P07900 732 aaKnown RBP16.88■□□□□ 0.29
CSHL1-208ENST00000558609 HNRNPA1P09651 372 aaKnown RBP eCLIP16.88■□□□□ 0.29
CSHL1-208ENST00000558609 GAP43P17677 238 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 OR1D2P34982 312 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 TNFSF9P41273 254 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 STAT6P42226 847 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 ENOX2Q16206 610 aaKnown RBP16.88■□□□□ 0.29
CSHL1-208ENST00000558609 IER5LQ5T953 404 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 RSPO2Q6UXX9 243 aaPredicted RBP16.88■□□□□ 0.29
CSHL1-208ENST00000558609 SFR1Q86XK3 245 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 UBALD2Q8IYN6 164 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 PRSS33Q8NF86 280 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 STAMQ92783 540 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 HVCN1Q96D96 273 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 MSTO1Q9BUK6 570 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 STRA6Q9BX79 667 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 PANK2Q9BZ23 570 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 RPF1Q9H9Y2 349 aaKnown RBP16.88■□□□□ 0.29
CSHL1-208ENST00000558609 NUB1Q9Y5A7 615 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 STYXL1Q9Y6J8 313 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 CLUHO75153 1309 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 USP34Q70CQ2 3546 aa16.88■□□□□ 0.29
CSHL1-208ENST00000558609 ZNF318Q5VUA4 2279 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 ANKRD63C9JTQ0 380 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 PPP1R37O75864 691 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
CSHL1-208ENST00000558609 CYP3A5P20815 502 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 LRPAP1P30533 357 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 HOXA9P31269 272 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 PPP2R3AQ06190 1150 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 MTMR3Q13615 1198 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 MRPL58Q14197 206 aaKnown RBP16.87■□□□□ 0.29
CSHL1-208ENST00000558609 UVSSAQ2YD98 709 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 ZBTB41Q5SVQ8 909 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 LIN9Q5TKA1 542 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 SLFN12LQ6IEE8 588 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 RTL10Q7L3V2 364 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 CD302Q8IX05 232 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 KIF12Q96FN5 646 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 ASIC4Q96FT7 647 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 SUSD3Q96L08 255 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 PIDD1Q9HB75 910 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 TUBGCP4Q9UGJ1 667 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 CPSF3Q9UKF6 684 aaKnown RBP16.87■□□□□ 0.29
CSHL1-208ENST00000558609 UBQLN1Q9UMX0 589 aaKnown RBP16.87■□□□□ 0.29
CSHL1-208ENST00000558609 CDY1Q9Y6F8 540 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 MYH15Q9Y2K3 1946 aa16.87■□□□□ 0.29
CSHL1-208ENST00000558609 TBC1D4O60343 1298 aa16.86■□□□□ 0.29
CSHL1-208ENST00000558609 N4BP1O75113 896 aaKnown RBP16.86■□□□□ 0.29
CSHL1-208ENST00000558609 F13A1P00488 732 aa16.86■□□□□ 0.29
CSHL1-208ENST00000558609 ASGR2P07307 311 aa16.86■□□□□ 0.29
CSHL1-208ENST00000558609 C8AP07357 584 aa16.86■□□□□ 0.29
CSHL1-208ENST00000558609 SPAG1Q07617 926 aa16.86■□□□□ 0.29
CSHL1-208ENST00000558609 PPM1LQ5SGD2 360 aa16.86■□□□□ 0.29
CSHL1-208ENST00000558609 VARS2Q5ST30 1063 aaKnown RBP16.86■□□□□ 0.29
CSHL1-208ENST00000558609 SLC8B1Q6J4K2 584 aa16.86■□□□□ 0.29
CSHL1-208ENST00000558609 PBXIP1Q96AQ6 731 aa16.86■□□□□ 0.29
CSHL1-208ENST00000558609 MRPL44Q9H9J2 332 aaKnown RBP16.86■□□□□ 0.29
CSHL1-208ENST00000558609 OLFML3Q9NRN5 406 aa16.86■□□□□ 0.29
CSHL1-208ENST00000558609 ZDBF2Q9HCK1 2354 aa16.86■□□□□ 0.29
CSHL1-208ENST00000558609 FRMD3A2A2Y4 597 aa16.85■□□□□ 0.29
CSHL1-208ENST00000558609 H7C4K7 107 aa16.85■□□□□ 0.29
CSHL1-208ENST00000558609 XPOTO43592 962 aaKnown RBP16.85■□□□□ 0.29
CSHL1-208ENST00000558609 CUTAO60888 179 aa16.85■□□□□ 0.29
CSHL1-208ENST00000558609 POU2F2P09086 479 aa16.85■□□□□ 0.29
CSHL1-208ENST00000558609 MCM4P33991 863 aa16.85■□□□□ 0.29
CSHL1-208ENST00000558609 POU5F1Q01860 360 aaKnown RBP16.85■□□□□ 0.29
CSHL1-208ENST00000558609 AXDND1Q5T1B0 1012 aaPredicted RBP16.85■□□□□ 0.29
CSHL1-208ENST00000558609 FOXD4L5Q5VV16 416 aaPredicted RBP16.85■□□□□ 0.29
CSHL1-208ENST00000558609 ATL3Q6DD88 541 aa16.85■□□□□ 0.29
CSHL1-208ENST00000558609 ADALQ6DHV7 355 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms