RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 CSGALNACT1Q8TDX6 532 aa19.63■□□□□ 0.73
TSPAN3-204ENST00000558394 SMARCD2Q92925 531 aa19.63■□□□□ 0.73
TSPAN3-204ENST00000558394 DDX27Q96GQ7 796 aaKnown RBP19.63■□□□□ 0.73
TSPAN3-204ENST00000558394 ASB16Q96NS5 453 aa19.63■□□□□ 0.73
TSPAN3-204ENST00000558394 GPRC5CQ9NQ84 441 aa19.63■□□□□ 0.73
TSPAN3-204ENST00000558394 CFAP47Q6ZTR5 3102 aa19.63■□□□□ 0.73
TSPAN3-204ENST00000558394 I3L4J1 428 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 GDF9O60383 454 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 PRKCBP05771 671 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 XRCC6P12956 609 aaKnown RBP eCLIP19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 ATP2B1P20020 1258 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 CCNE1P24864 410 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 TOB2Q14106 344 aaPredicted RBP19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 CALCRLQ16602 461 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 DCAF4L1Q3SXM0 396 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 AASDHQ4L235 1098 aaPredicted RBP19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 CDCA2Q69YH5 1023 aaPredicted RBP19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 C1orf228Q6PIY5 440 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 LONP2Q86WA8 852 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 MAP4K3Q8IVH8 894 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 YAF2Q8IY57 180 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 SPEM1Q8N4L4 309 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 TCEAL4Q96EI5 215 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 LARP6Q9BRS8 491 aaKnown RBP19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 CXCL16Q9H2A7 254 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 DAXXQ9UER7 740 aaPredicted RBP19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 CYP46A1Q9Y6A2 500 aa19.62■□□□□ 0.73
TSPAN3-204ENST00000558394 TRIP11Q15643 1979 aa19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 WDR27A2RRH5 827 aa19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 HRO43593 1189 aa19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 CHRNB1P11230 501 aa19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 ATF2P15336 505 aa19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 UPP1Q16831 310 aa19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 HEATR6Q6AI08 1181 aaKnown RBP19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 SLC8B1Q6J4K2 584 aa19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 VITQ6UXI7 678 aa19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 C12orf50Q8NA57 414 aaPredicted RBP19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 DEPTORQ8TB45 409 aa19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 FAM200AQ8TCP9 573 aa19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 MSANTD3Q96H12 275 aa19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 ZNF512Q96ME7 567 aaPredicted RBP19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 TTC12Q9H892 705 aaPredicted RBP19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 BRMS1Q9HCU9 246 aa19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 CNOT1A5YKK6 2376 aaKnown RBP19.61■□□□□ 0.73
TSPAN3-204ENST00000558394 PDCD11Q14690 1871 aaKnown RBP19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 USP24Q9UPU5 2620 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 A0A087WWV3 80 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 TTLL13PA6NNM8 815 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 H7C4K7 107 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 ACKR2O00590 384 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 ABLIM3O94929 683 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 TXKP42681 527 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 BRCC3P46736 316 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 KPNA1P52294 538 aaPredicted RBP19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 SRSF5Q13243 272 aaKnown RBP19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 POTEHQ6S545 545 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 TCEAL8Q8IYN2 117 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 LEMD2Q8NC56 503 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 OXER1Q8TDS5 423 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 SLITRK6Q9H5Y7 841 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 INSL5Q9Y5Q6 135 aa19.6■□□□□ 0.73
TSPAN3-204ENST00000558394 REC8O95072 547 aa19.59■□□□□ 0.73
TSPAN3-204ENST00000558394 MYL4P12829 197 aa19.59■□□□□ 0.73
TSPAN3-204ENST00000558394 VIPR2P41587 438 aa19.59■□□□□ 0.73
TSPAN3-204ENST00000558394 YARSP54577 528 aaKnown RBP19.59■□□□□ 0.73
TSPAN3-204ENST00000558394 PTGDRQ13258 359 aa19.59■□□□□ 0.73
TSPAN3-204ENST00000558394 SKAP1Q86WV1 359 aa19.59■□□□□ 0.73
TSPAN3-204ENST00000558394 ZSCAN18Q8TBC5 510 aaPredicted RBP19.59■□□□□ 0.73
TSPAN3-204ENST00000558394 E2F7Q96AV8 911 aa19.59■□□□□ 0.73
TSPAN3-204ENST00000558394 PPP1R10Q96QC0 940 aaKnown RBP19.59■□□□□ 0.73
TSPAN3-204ENST00000558394 GOLGA2P5Q9HBQ8 144 aa19.59■□□□□ 0.73
TSPAN3-204ENST00000558394 ASAH2Q9NR71 780 aa19.59■□□□□ 0.73
TSPAN3-204ENST00000558394 IGFBP6P24592 240 aaPredicted RBP19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 KRT2P35908 639 aa19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 CCR2P41597 374 aa19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 MLLT6P55198 1093 aaPredicted RBP19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 PPP2R5AQ15172 486 aa19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 TPGS2Q68CL5 300 aa19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 MFSD6LQ8IWD5 586 aa19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 FAM160A2Q8N612 972 aaPredicted RBP19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 ZSWIM3Q96MP5 696 aa19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 GPR88Q9GZN0 384 aa19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 C8orf33Q9H7E9 229 aaPredicted RBP19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 ZSWIM6Q9HCJ5 1215 aa19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 TOPORSQ9NS56 1045 aaPredicted RBP19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 SLC38A7Q9NVC3 462 aa19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 USP20Q9Y2K6 914 aa19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 NUB1Q9Y5A7 615 aa19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 COL4A2P08572 1712 aa19.58■□□□□ 0.72
TSPAN3-204ENST00000558394 GREB1Q4ZG55 1949 aa19.57■□□□□ 0.72
TSPAN3-204ENST00000558394 HEPACAM2A8MVW5 462 aa19.57■□□□□ 0.72
TSPAN3-204ENST00000558394 SYN3O14994 580 aa19.57■□□□□ 0.72
TSPAN3-204ENST00000558394 NAMPTP43490 491 aa19.57■□□□□ 0.72
TSPAN3-204ENST00000558394 LIMK1P53667 647 aa19.57■□□□□ 0.72
TSPAN3-204ENST00000558394 GAS6Q14393 721 aa19.57■□□□□ 0.72
TSPAN3-204ENST00000558394 CTXN3Q4LDR2 81 aa19.57■□□□□ 0.72
TSPAN3-204ENST00000558394 EARS2Q5JPH6 523 aaKnown RBP19.57■□□□□ 0.72
TSPAN3-204ENST00000558394 DGKKQ5KSL6 1271 aa19.57■□□□□ 0.72
TSPAN3-204ENST00000558394 N4BP2L1Q5TBK1 243 aaPredicted RBP19.57■□□□□ 0.72
TSPAN3-204ENST00000558394 EEF1DP3Q658K8 133 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms