RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 CASTOR2A6NHX0 329 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 PRRG1O14668 218 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 DGAT1O75907 488 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 B3GAT3O94766 335 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 KIF4AO95239 1232 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 KCNK5O95279 499 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 PAPSS2O95340 614 aaPredicted RBP5.73□□□□□ -1.49
SPG11-208ENST00000558155 BAG4O95429 457 aaKnown RBP5.73□□□□□ -1.49
SPG11-208ENST00000558155 TDP2O95551 362 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 IFNAR1P17181 557 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 FGFR3P22607 806 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 CCNE1P24864 410 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 HOXA6P31267 233 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 ARL2P36404 184 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 RBM25P49756 843 aaKnown RBP5.73□□□□□ -1.49
SPG11-208ENST00000558155 KPNA1P52294 538 aaPredicted RBP5.73□□□□□ -1.49
SPG11-208ENST00000558155 MBTD1Q05BQ5 628 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 SSRP1Q08945 709 aaKnown RBP5.73□□□□□ -1.49
SPG11-208ENST00000558155 PTGDRQ13258 359 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 GRM2Q14416 872 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 NTRK3Q16288 839 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 TMEM132AQ24JP5 1023 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 SLC5A9Q2M3M2 681 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 STPG1Q5TH74 334 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 PPP4R3AQ6IN85 833 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 IQCEQ6IPM2 695 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 GALNT17Q6IS24 598 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 Q6ZUG5 572 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 PDZD4Q76G19 769 aaPredicted RBP5.73□□□□□ -1.49
SPG11-208ENST00000558155 CACNA2D4Q7Z3S7 1137 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 MFSD6LQ8IWD5 586 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 TPH2Q8IWU9 490 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 HOMEZQ8IX15 550 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 TRIM22Q8IYM9 498 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 BLIDQ8IZY5 108 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 SYNPOQ8N3V7 929 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 LEMD2Q8NC56 503 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 FAM200AQ8TCP9 573 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 HASPINQ8TF76 798 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 DEPDC1BQ8WUY9 529 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 SMARCD2Q92925 531 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 ZNF512Q96ME7 567 aaPredicted RBP5.73□□□□□ -1.49
SPG11-208ENST00000558155 NAP1L4Q99733 375 aaKnown RBP5.73□□□□□ -1.49
SPG11-208ENST00000558155 CORO1BQ9BR76 489 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 PAAF1Q9BRP4 392 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 LSM14BQ9BX40 385 aaKnown RBP5.73□□□□□ -1.49
SPG11-208ENST00000558155 ANKEF1Q9NU02 776 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 KIAA1468Q9P260 1216 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 ZMIZ1Q9ULJ6 1067 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 GREB1Q4ZG55 1949 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 DNAH14Q0VDD8 3507 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 WDR27A2RRH5 827 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 TMEM8BA6NDV4 472 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 H7C4K7 107 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 TMEM189-UBE2V1I3L0A0 370 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 K7ESF4 209 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 N4BP3O15049 544 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 ZBTB39O15060 712 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 TBX3O15119 743 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 ABLIM3O94929 683 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 SLITRK3O94933 977 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 XRCC6P12956 609 aaKnown RBP eCLIP5.72□□□□□ -1.49
SPG11-208ENST00000558155 ATF2P15336 505 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 GCFC2P16383 781 aaKnown RBP5.72□□□□□ -1.49
SPG11-208ENST00000558155 CEBPBP17676 345 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 GLRA2P23416 452 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 FCARP24071 287 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 SRSF5Q13243 272 aaKnown RBP5.72□□□□□ -1.49
SPG11-208ENST00000558155 CTTNQ14247 550 aaKnown RBP5.72□□□□□ -1.49
SPG11-208ENST00000558155 GAS6Q14393 721 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 SF3A2Q15428 464 aaKnown RBP5.72□□□□□ -1.49
SPG11-208ENST00000558155 AMHR2Q16671 573 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 ADCK5Q3MIX3 580 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 PRSS36Q5K4E3 855 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 RNF43Q68DV7 783 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 VITQ6UXI7 678 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 UNQ6494/PRO21346Q6UXR6 183 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 KRT25Q7Z3Z0 450 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 APBB1IPQ7Z5R6 666 aaPredicted RBP5.72□□□□□ -1.49
SPG11-208ENST00000558155 WDR5BQ86VZ2 330 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 CDR2LQ86X02 465 aaPredicted RBP5.72□□□□□ -1.49
SPG11-208ENST00000558155 ZBTB8OSQ8IWT0 167 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 TCEAL8Q8IYN2 117 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 FAM177A1Q8N128 213 aaPredicted RBP5.72□□□□□ -1.49
SPG11-208ENST00000558155 KDF1Q8NAX2 398 aaPredicted RBP5.72□□□□□ -1.49
SPG11-208ENST00000558155 ASAP3Q8TDY4 903 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 BRF1Q92994 677 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 DDX27Q96GQ7 796 aaKnown RBP5.72□□□□□ -1.49
SPG11-208ENST00000558155 DYDC2Q96IM9 177 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 ZFRQ96KR1 1074 aaKnown RBP5.72□□□□□ -1.49
SPG11-208ENST00000558155 PRIMPOLQ96LW4 560 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 CCDC43Q96MW1 224 aaKnown RBP5.72□□□□□ -1.49
SPG11-208ENST00000558155 UROC1Q96N76 676 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 ASB16Q96NS5 453 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 ADPGKQ9BRR6 497 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 LXNQ9BS40 222 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 TRPV4Q9HBA0 871 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 CYP4F11Q9HBI6 524 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 XPNPEP1Q9NQW7 623 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 PRMT7Q9NVM4 692 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms