RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 GANQ9H2C0 597 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 SIX2Q9NPC8 291 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 TMEM161AQ9NX61 479 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 DPP3Q9NY33 737 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 SCN5AQ14524 2016 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 NOL4O94818 638 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 KRT19P08727 400 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 POLR2FP61218 127 aaKnown RBP18.17■□□□□ 0.5
SNX1-203ENST00000558040 RBP5P82980 135 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 ZBED6P86452 979 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 ZBTB6Q15916 424 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 SGSM1Q2NKQ1 1148 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 GLRA4Q5JXX5 417 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 GLB1LQ6UWU2 654 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 C1orf127Q8N9H9 656 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 FAM84AQ96KN4 292 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 ZMAT2Q96NC0 199 aaKnown RBP18.17■□□□□ 0.5
SNX1-203ENST00000558040 GAD1Q99259 594 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 NUCKS1Q9H1E3 243 aaKnown RBP18.17■□□□□ 0.5
SNX1-203ENST00000558040 LRFN2Q9ULH4 789 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 PCDHB7Q9Y5E2 793 aa18.17■□□□□ 0.5
SNX1-203ENST00000558040 ARL5CA6NH57 179 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 MEIS3P2A8K0S8 358 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 EPHB6O15197 1021 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 HOXA2O43364 376 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 NRDCO43847 1150 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 EFCAB14O75071 495 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 ITGB3P05106 788 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 THP07101 528 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 ATICP31939 592 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 KRT9P35527 623 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 FXR1P51114 621 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNX1-203ENST00000558040 COL13A1Q5TAT6 717 aaPredicted RBP18.16■□□□□ 0.5
SNX1-203ENST00000558040 DPY19L2P1Q6NXN4 242 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 ENOSF1Q7L5Y1 443 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 FMNL3Q8IVF7 1028 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 C7orf61Q8IZ16 206 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 URGCPQ8TCY9 931 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 RSPH1Q8WYR4 309 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 TRIM44Q96DX7 344 aaPredicted RBP18.16■□□□□ 0.5
SNX1-203ENST00000558040 ZFP42Q96MM3 310 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 SPAG5Q96R06 1193 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 MYO6Q9UM54 1294 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 FHOD1Q9Y613 1164 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 BRCA2P51587 3418 aa18.16■□□□□ 0.5
SNX1-203ENST00000558040 ABHD14A-ACY1A0A1B0GW23 586 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 PTGESO14684 152 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 INPPL1O15357 1258 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 ASS1P00966 412 aaKnown RBP18.15■□□□□ 0.5
SNX1-203ENST00000558040 CSF2RAP15509 400 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 ITGB8P26012 769 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 POLR2BP30876 1174 aaKnown RBP18.15■□□□□ 0.5
SNX1-203ENST00000558040 MFAP3P55082 362 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 ADKP55263 362 aaKnown RBP18.15■□□□□ 0.5
SNX1-203ENST00000558040 MYL6P60660 151 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 NOP14P78316 857 aaKnown RBP18.15■□□□□ 0.5
SNX1-203ENST00000558040 APBA1Q02410 837 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 LRMPQ12912 555 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 GRIK3Q13003 919 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 PPIGQ13427 754 aaKnown RBP eCLIP18.15■□□□□ 0.52e-7■■□□□ 12.1
SNX1-203ENST00000558040 ZNF699Q32M78 642 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 PHLDB3Q6NSJ2 640 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 PPM1KQ8N3J5 372 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 TC2NQ8N9U0 490 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 OR8K1Q8NGG5 319 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 PPP1R10Q96QC0 940 aaKnown RBP18.15■□□□□ 0.5
SNX1-203ENST00000558040 PANX2Q96RD6 677 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 PI4K2AQ9BTU6 479 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 CXCL16Q9H2A7 254 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 UBE2TQ9NPD8 197 aaPredicted RBP18.15■□□□□ 0.5
SNX1-203ENST00000558040 NLRC4Q9NPP4 1024 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 ABHD10Q9NUJ1 306 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 ZNHIT6Q9NWK9 470 aaKnown RBP18.15■□□□□ 0.5
SNX1-203ENST00000558040 TUBGCP4Q9UGJ1 667 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 SIX4Q9UIU6 781 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 DNAJC12Q9UKB3 198 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 AGAP1Q9UPQ3 857 aa18.15■□□□□ 0.5
SNX1-203ENST00000558040 PDCD11Q14690 1871 aaKnown RBP18.15■□□□□ 0.5
SNX1-203ENST00000558040 RBAK-RBAKDNI3L0D1 243 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 EVI5O60447 810 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 OFD1O75665 1012 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 STAU1O95793 577 aaKnown RBP18.14■□□□□ 0.49
SNX1-203ENST00000558040 CST3P01034 146 aaPredicted RBP18.14■□□□□ 0.49
SNX1-203ENST00000558040 TBXAS1P24557 533 aaPredicted RBP18.14■□□□□ 0.49
SNX1-203ENST00000558040 SCNN1GP51170 649 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 GCNT1Q02742 428 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 MYO1EQ12965 1108 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 RAPGEF1Q13905 1077 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 TCTN1Q2MV58 587 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 IQCEQ6IPM2 695 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 RRAGAQ7L523 313 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 NPAS4Q8IUM7 802 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 ABI1Q8IZP0 508 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 LRRC52Q8N7C0 313 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 CCDC112Q8NEF3 446 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 BAP1Q92560 729 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 C18orf25Q96B23 403 aaPredicted RBP18.14■□□□□ 0.49
SNX1-203ENST00000558040 FAXDC2Q96IV6 333 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 DNAJC7Q99615 494 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 NAA15Q9BXJ9 866 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms