RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 POC1B-GALNT4F8VUJ3 575 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 CFHP08603 1231 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 CD58P19256 250 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 TARSP26639 723 aaKnown RBP12.11□□□□□ -0.47
SRP54-213ENST00000556994 CNGA1P29973 690 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 TAS2R40P59535 323 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 LACTBP83111 547 aaPredicted RBP12.11□□□□□ -0.47
SRP54-213ENST00000556994 ATP11AP98196 1134 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 STRN3Q13033 797 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 SV2AQ7L0J3 742 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 PASD1Q8IV76 773 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 GLIS1Q8NBF1 620 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 GRK7Q8WTQ7 553 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 POMGNT1Q8WZA1 660 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 ZNF622Q969S3 477 aaKnown RBP eCLIP12.11□□□□□ -0.477e-7■■□□□ 11.8
SRP54-213ENST00000556994 RIT2Q99578 217 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 RANBP17Q9H2T7 1088 aaKnown RBP12.11□□□□□ -0.47
SRP54-213ENST00000556994 EHMT1Q9H9B1 1298 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 NKX1-2Q9UD57 310 aaPredicted RBP12.11□□□□□ -0.47
SRP54-213ENST00000556994 HAO1Q9UJM8 370 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 ADGRA3Q8IWK6 1321 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 ECE2O60344 883 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 SORBS3O60504 671 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 UNC5CO95185 931 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 ZSCAN5DPP0CG00 497 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 UNGP13051 313 aaPredicted RBP12.11□□□□□ -0.47
SRP54-213ENST00000556994 CCNB1P14635 433 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 ATP2A2P16615 1042 aaKnown RBP12.11□□□□□ -0.47
SRP54-213ENST00000556994 MAGEA4P43358 317 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 QARSP47897 775 aaKnown RBP12.11□□□□□ -0.47
SRP54-213ENST00000556994 GPC3P51654 580 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 P3H1Q32P28 736 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 KAZNQ674X7 775 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 RNF43Q68DV7 783 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 VSIG1Q86XK7 387 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 ERP27Q96DN0 273 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 RBM15Q96T37 977 aaKnown RBP eCLIP12.11□□□□□ -0.47
SRP54-213ENST00000556994 FAM167BQ9BTA0 163 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 TRIM6Q9C030 488 aaPredicted RBP12.11□□□□□ -0.47
SRP54-213ENST00000556994 TMX4Q9H1E5 349 aaPredicted RBP12.11□□□□□ -0.47
SRP54-213ENST00000556994 TMEM8AQ9HCN3 771 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 SLC5A4Q9NY91 659 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 LGALS13Q9UHV8 139 aa12.11□□□□□ -0.47
SRP54-213ENST00000556994 FAM47DPA6NHR8 397 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 TCEA3O75764 348 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 FDX1P10109 184 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 ETS1P14921 441 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 IL9RQ01113 521 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 MKRN3Q13064 507 aaKnown RBP12.1□□□□□ -0.47
SRP54-213ENST00000556994 ALCAMQ13740 583 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 FASTKD3Q14CZ7 662 aaKnown RBP12.1□□□□□ -0.47
SRP54-213ENST00000556994 ATP13A4Q4VNC1 1196 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 ANKRD20A2Q5SQ80 823 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 ANKRD20A1Q5TYW2 823 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 STRIP1Q5VSL9 837 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 ANKRD20A3Q5VUR7 823 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 TEX2Q8IWB9 1127 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 C4orf33Q8N1A6 199 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 MAML1Q92585 1016 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 CCDC77Q9BR77 488 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 PLCD4Q9BRC7 762 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 GLIS2Q9BZE0 524 aaPredicted RBP12.1□□□□□ -0.47
SRP54-213ENST00000556994 SAYSD1Q9NPB0 183 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 GRID1Q9ULK0 1009 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 TBX20Q9UMR3 447 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 PHTF1Q9UMS5 762 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 USP20Q9Y2K6 914 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 TMX2Q9Y320 296 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 NEU2Q9Y3R4 380 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 EXOC1LA0A1B0GW35 172 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 CLRN2A0PK11 232 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 PI4K2BG5E9Z4 385 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 NFIBO00712 420 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 UPP2O95045 317 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 MAPTP10636 758 aaKnown RBP12.1□□□□□ -0.47
SRP54-213ENST00000556994 KRT10P13645 584 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 NPR1P16066 1061 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 GCAP28676 217 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 CAV1Q03135 178 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 KLF1Q13351 362 aaPredicted RBP12.1□□□□□ -0.47
SRP54-213ENST00000556994 STAT4Q14765 748 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 PKN2Q16513 984 aaKnown RBP12.1□□□□□ -0.47
SRP54-213ENST00000556994 XKR9Q5GH70 373 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 MIS18BP1Q6P0N0 1132 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 ZNF449Q6P9G9 518 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 PPP1R21Q6ZMI0 780 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 SYDE1Q6ZW31 735 aaPredicted RBP12.1□□□□□ -0.47
SRP54-213ENST00000556994 ANKRD35Q8N283 1001 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 FBF1Q8TES7 1133 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 SPDL1Q96EA4 605 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 C11orf70Q9BRQ4 267 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 FHDC1Q9C0D6 1143 aaPredicted RBP12.1□□□□□ -0.47
SRP54-213ENST00000556994 CHKBQ9Y259 395 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 COQ4Q9Y3A0 265 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.1□□□□□ -0.47
SRP54-213ENST00000556994 UBR3Q6ZT12 1888 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 SCN9AQ15858 1988 aa12.1□□□□□ -0.47
SRP54-213ENST00000556994 MYPNQ86TC9 1320 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 DENND3A2RUS2 1198 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 PIAS1O75925 651 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms