RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 SF3A1Q15459 793 aaKnown RBP5.6□□□□□ -1.51
ATXN3-243ENST00000556671 FAM209AQ5JX71 171 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 BTBD8Q5XKL5 378 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 TSHZ3Q63HK5 1081 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 RGMBQ6NW40 437 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 ARHGAP36Q6ZRI8 547 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 TEX11Q8IYF3 940 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 DNAJC5GQ8N7S2 189 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 MIGA1Q8NAN2 632 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 Q8TCH9 128 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 FBXW5Q969U6 566 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 EDC3Q96F86 508 aaKnown RBP5.6□□□□□ -1.51
ATXN3-243ENST00000556671 MRIQ9BWK5 157 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 AATFQ9NY61 560 aaKnown RBP eCLIP5.6□□□□□ -1.51
ATXN3-243ENST00000556671 PFDN2Q9UHV9 154 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 PCDHA8Q9Y5H6 950 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 OTOFQ9HC10 1997 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 NAV1Q8NEY1 1877 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 MAST2Q6P0Q8 1798 aa5.6□□□□□ -1.51
ATXN3-243ENST00000556671 SALL1Q9NSC2 1324 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 ZNFX1Q9P2E3 1918 aaKnown RBP5.59□□□□□ -1.51
ATXN3-243ENST00000556671 MYH4Q9Y623 1939 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-243ENST00000556671 MAN2B1O00754 1011 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 CUTAO60888 179 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 IGHDP01880 384 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 CENPBP07199 599 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-243ENST00000556671 NAT1P18440 290 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 RGS3P49796 1198 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 FIGNQ5HY92 759 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 SLC9C2Q5TAH2 1124 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 APOBEC3HQ6NTF7 200 aaKnown RBP5.59□□□□□ -1.51
ATXN3-243ENST00000556671 C16orf59Q7L2K0 433 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 MAPKAPK5Q8IW41 473 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 ZFPM1Q8IX07 1006 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 PALM2Q8IXS6 379 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 TGFBRAP1Q8WUH2 860 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 RILPL2Q969X0 211 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 NSUN4Q96CB9 384 aaKnown RBP5.59□□□□□ -1.51
ATXN3-243ENST00000556671 GCC1Q96CN9 775 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 ZBED3Q96IU2 234 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-243ENST00000556671 EXOC2Q96KP1 924 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATXN3-243ENST00000556671 SEMA4AQ9H3S1 761 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 ECHDC1Q9NTX5 307 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 RIC8BQ9NVN3 520 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 PAG1Q9NWQ8 432 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 SAP30BPQ9UHR5 308 aaKnown RBP5.59□□□□□ -1.51
ATXN3-243ENST00000556671 CBLCQ9ULV8 474 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 TCAF1Q9Y4C2 921 aa5.59□□□□□ -1.51
ATXN3-243ENST00000556671 COL1A1P02452 1464 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-243ENST00000556671 MROH7-TTC4A0A0A0MT08 1334 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 ERC2O15083 957 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 APPP05067 770 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 ZNF888P0CJ79 500 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-243ENST00000556671 PYGMP11217 842 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 PDE6AP16499 860 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 ATP5JP18859 108 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 GJA4P35212 333 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 GABREP78334 506 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 GUCY1A3Q02108 690 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 KIF23Q02241 960 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-243ENST00000556671 TOP3AQ13472 1001 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-243ENST00000556671 USP10Q14694 798 aaKnown RBP5.58□□□□□ -1.52
ATXN3-243ENST00000556671 LONRF2Q1L5Z9 754 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 ZSCAN25Q6NSZ9 544 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 TCTN3Q6NUS6 607 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 SLC16A11Q8NCK7 471 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 OTUD7AQ8TE49 926 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-243ENST00000556671 FAM151AQ8WW52 585 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 SREK1Q8WXA9 508 aaKnown RBP5.58□□□□□ -1.52
ATXN3-243ENST00000556671 HOOK2Q96ED9 719 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 CLMNQ96JQ2 1002 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 IPO9Q96P70 1041 aaKnown RBP5.58□□□□□ -1.52
ATXN3-243ENST00000556671 GNRHR2Q96P88 292 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 LMF1Q96S06 567 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 TANGO6Q9C0B7 1094 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.58□□□□□ -1.52
ATXN3-243ENST00000556671 CATSPERZQ9NTU4 200 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 SIRPGQ9P1W8 387 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 PTPN22Q9Y2R2 807 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 TESMINQ9Y4I5 508 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 PPP2R3BQ9Y5P8 575 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 ATP23Q9Y6H3 246 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 MGAMO43451 1857 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 DOCK1Q14185 1865 aa5.58□□□□□ -1.52
ATXN3-243ENST00000556671 PAPPA2Q9BXP8 1791 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 CNTNAP1P78357 1384 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 DOCK3Q8IZD9 2030 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 ZNF532Q9HCE3 1301 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 MYH6P13533 1939 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 GPR75-ASB3A0A0A6YYF3 556 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 RASSF10A6NK89 507 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 CCDC85CA6NKD9 419 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 ZNF561-AS1K7EIQ3 104 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 MUSKO15146 869 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 FSHBP01225 129 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 FAM153BP0C7A2 387 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 C6P13671 934 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 ATP2B1P20020 1258 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms