RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 VCPP55072 806 aaKnown RBP7.37□□□□□ -1.23
PSEN1-216ENST00000556066 DSG1Q02413 1049 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 HSP90AA2PQ14568 343 aaPredicted RBP7.37□□□□□ -1.23
PSEN1-216ENST00000556066 FAM187BQ17R55 369 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 USP41Q3LFD5 358 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 KIAA0319Q5VV43 1072 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 EEF1DP3Q658K8 133 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 PRSS55Q6UWB4 352 aaPredicted RBP7.37□□□□□ -1.23
PSEN1-216ENST00000556066 OTOP3Q7RTS5 596 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 UBALD2Q8IYN6 164 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 ZDHHC14Q8IZN3 488 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 C4orf32Q8N8J7 132 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 LRRN4Q8WUT4 740 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 KIFAP3Q92845 792 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 PAAF1Q9BRP4 392 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 RAB34Q9BZG1 259 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 PIDD1Q9HB75 910 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 FAM86C1Q9NVL1 165 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 DPP7Q9UHL4 492 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 USTQ9Y2C2 406 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 KIF3AQ9Y496 699 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 PCDHB6Q9Y5E3 794 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 CHD8Q9HCK8 2581 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 SF3B1O75533 1304 aaKnown RBP eCLIP7.36□□□□□ -1.234e-7■■■■■ 86.2
PSEN1-216ENST00000556066 E9PMD0 336 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 K7ERI5 159 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 PTGESO14684 152 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 TGM5O43548 720 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 DXOO77932 396 aaKnown RBP7.36□□□□□ -1.23
PSEN1-216ENST00000556066 KIF4AO95239 1232 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 EDN1P05305 212 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 MUTP22033 750 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 U2AF2P26368 475 aaKnown RBP eCLIP7.36□□□□□ -1.23
PSEN1-216ENST00000556066 CDC25AP30304 524 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 AVPR2P30518 371 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 RPIAP49247 311 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 TOB1P50616 345 aaPredicted RBP7.36□□□□□ -1.23
PSEN1-216ENST00000556066 MMP16P51512 607 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 EFNA5P52803 228 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 PEX3P56589 373 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 TUSC3Q13454 348 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 PDIA5Q14554 519 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 RABEP1Q15276 862 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 GLRA4Q5JXX5 417 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 ATF7IP2Q5U623 682 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 FAM171A1Q5VUB5 890 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 KRT79Q5XKE5 535 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 DTHD1Q6ZMT9 781 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 C15orf39Q6ZRI6 1047 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 RNF168Q8IYW5 571 aaPredicted RBP7.36□□□□□ -1.23
PSEN1-216ENST00000556066 SMG7Q92540 1137 aaKnown RBP7.36□□□□□ -1.23
PSEN1-216ENST00000556066 POM121Q96HA1 1249 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 CCDC113Q9H0I3 377 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 CXCL16Q9H2A7 254 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 MFSD1Q9H3U5 465 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 RXFP1Q9HBX9 757 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.36□□□□□ -1.23
PSEN1-216ENST00000556066 CHST7Q9NS84 486 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 BCCIPQ9P287 314 aaKnown RBP eCLIP7.36□□□□□ -1.23
PSEN1-216ENST00000556066 DNM3Q9UQ16 869 aa7.36□□□□□ -1.23
PSEN1-216ENST00000556066 GPR179Q6PRD1 2367 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 ZMYM2Q9UBW7 1377 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 MYH15Q9Y2K3 1946 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 CLUHO75153 1309 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 PDCD11Q14690 1871 aaKnown RBP7.35□□□□□ -1.23
PSEN1-216ENST00000556066 DCHS1Q96JQ0 3298 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 SFI1A8K8P3 1242 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 H3BQV1 296 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 LAD1O00515 517 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 WIPF1O43516 503 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 HIP1RO75146 1068 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 EFEMP2O95967 443 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 NPTX2P47972 431 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 OSTNP61366 133 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 CREMQ03060 361 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 PDE4CQ08493 712 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 DMP1Q13316 513 aaPredicted RBP7.35□□□□□ -1.23
PSEN1-216ENST00000556066 PSMD5Q16401 504 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 IL17AQ16552 155 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 PTPRNQ16849 979 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 DCAF4L1Q3SXM0 396 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 ZNF568Q3ZCX4 644 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 RTP2Q5QGT7 225 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 NT5DC1Q5TFE4 455 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 APBB1IPQ7Z5R6 666 aaPredicted RBP7.35□□□□□ -1.23
PSEN1-216ENST00000556066 IGSF22Q8N9C0 903 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 FLCNQ8NFG4 579 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 CMASQ8NFW8 434 aaPredicted RBP7.35□□□□□ -1.23
PSEN1-216ENST00000556066 STAMQ92783 540 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 PLIN2Q99541 437 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 PRRX2Q99811 253 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 TCHPQ9BT92 498 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 TTPALQ9BTX7 342 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 RUSC1Q9BVN2 902 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 PLEKHA4Q9H4M7 779 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 UPF2Q9HAU5 1272 aaKnown RBP7.35□□□□□ -1.23
PSEN1-216ENST00000556066 KCNK12Q9HB15 430 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 WDR6Q9NNW5 1121 aaKnown RBP7.35□□□□□ -1.23
PSEN1-216ENST00000556066 KMT5AQ9NQR1 393 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms