RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 B3GAT3O94766 335 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 SPINK2P20155 84 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 TKTP29401 623 aaKnown RBP10.67□□□□□ -0.7
SCFD1-215ENST00000555259 ELF1P32519 619 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 SOX9P48436 509 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 RING1Q06587 406 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 NTRK3Q16288 839 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 DGKKQ5KSL6 1271 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 RNF43Q68DV7 783 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 SLC8B1Q6J4K2 584 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 ANKS3Q6ZW76 656 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 KBTBD6Q86V97 674 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 ZSCAN18Q8TBC5 510 aaPredicted RBP10.67□□□□□ -0.7
SCFD1-215ENST00000555259 CSGALNACT1Q8TDX6 532 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 GAB3Q8WWW8 586 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 COL26A1Q96A83 441 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 SLC26A6Q9BXS9 759 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 TRPV4Q9HBA0 871 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 KCNMB3Q9NPA1 279 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 SNTG2Q9NY99 539 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 RGL1Q9NZL6 768 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 PCDHA4Q9UN74 947 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 PCDHGA5Q9Y5G8 931 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 ARID2Q68CP9 1835 aa10.67□□□□□ -0.7
SCFD1-215ENST00000555259 HEPACAM2A8MVW5 462 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 MOSPD3O75425 235 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 RPP40O75818 363 aaKnown RBP10.66□□□□□ -0.7
SCFD1-215ENST00000555259 RECQL4O94761 1208 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 ABLIM3O94929 683 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 GLRA2P23416 452 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 ARL2P36404 184 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 MPLP40238 635 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 KPNA1P52294 538 aaPredicted RBP10.66□□□□□ -0.7
SCFD1-215ENST00000555259 FGD1P98174 961 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 ZNF252P-AS1Q0IIN9 211 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 EPHA7Q15375 998 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 CYP4A22Q5TCH4 519 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 TXNDC11Q6PKC3 985 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 RASEFQ8IZ41 740 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 GATA6Q92908 595 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 FAM20AQ96MK3 541 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 C8orf33Q9H7E9 229 aaPredicted RBP10.66□□□□□ -0.7
SCFD1-215ENST00000555259 ZSWIM4Q9H7M6 989 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 CYP4F11Q9HBI6 524 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 SH3GLB2Q9NR46 395 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 LHX6Q9UPM6 363 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 CELSR3Q9NYQ7 3312 aa10.66□□□□□ -0.7
SCFD1-215ENST00000555259 MYBPHLA2RUH7 354 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 I3L4J1 428 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 M0R2N6 131 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 TOP3BO95985 862 aaKnown RBP10.65□□□□□ -0.7
SCFD1-215ENST00000555259 ATF2P15336 505 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 CTHP32929 405 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 PXNP49023 591 aaPredicted RBP10.65□□□□□ -0.7
SCFD1-215ENST00000555259 CLCNKBP51801 687 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 CYP4A11Q02928 519 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 CCINQ13939 588 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 CTTNQ14247 550 aaKnown RBP10.65□□□□□ -0.7
SCFD1-215ENST00000555259 TSGA10IPQ3SY00 556 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 TCEAL6Q6IPX3 200 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 CD300LGQ6UXG3 332 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 TCEAL8Q8IYN2 117 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 HS6ST3Q8IZP7 471 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 TCEAL3Q969E4 200 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 RSPRY1Q96DX4 576 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 DYDC2Q96IM9 177 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 PRIMPOLQ96LW4 560 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 VPS45Q9NRW7 570 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 INSL5Q9Y5Q6 135 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 GCN1Q92616 2671 aaKnown RBP10.65□□□□□ -0.7
SCFD1-215ENST00000555259 ITPR1Q14643 2758 aa10.65□□□□□ -0.7
SCFD1-215ENST00000555259 PDCD11Q14690 1871 aaKnown RBP10.65□□□□□ -0.71
SCFD1-215ENST00000555259 CCDC163A0A0D9SF12 145 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 SPECC1L-ADORA2AF8WAN1 911 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 TBX3O15119 743 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 CHADO15335 359 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 TRAPPC3O43617 180 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 EXTL3O43909 919 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 DGAT1O75907 488 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 SEC24AO95486 1093 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 HMGB1P09429 215 aaKnown RBP10.65□□□□□ -0.71
SCFD1-215ENST00000555259 CCDC192P0DO97 292 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 IFNAR1P17181 557 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 GJA1P17302 382 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 RBM25P49756 843 aaKnown RBP10.65□□□□□ -0.71
SCFD1-215ENST00000555259 FCHO2Q0JRZ9 810 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 INF2Q27J81 1249 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 IQCEQ6IPM2 695 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 RALGPS2Q86X27 583 aaPredicted RBP10.65□□□□□ -0.71
SCFD1-215ENST00000555259 YAF2Q8IY57 180 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 BLIDQ8IZY5 108 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 SYNPOQ8N3V7 929 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 C3orf58Q8NDZ4 430 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 ZCCHC14Q8WYQ9 949 aaKnown RBP10.65□□□□□ -0.71
SCFD1-215ENST00000555259 BRF1Q92994 677 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 E2F7Q96AV8 911 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 EDEM2Q9BV94 578 aa10.65□□□□□ -0.71
SCFD1-215ENST00000555259 TTLL13PA6NNM8 815 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 C4orf47A7E2U8 309 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 AKAP3O75969 853 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms